RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CDC42EP2O14613 210 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 AKAP8O43823 692 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 DLGAP3O95886 979 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 IGHA1P01876 353 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 RNH1P13489 461 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 FGF9P31371 208 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 SLC9A3P48764 834 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 SLC13A2Q13183 592 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 C1orf61Q13536 156 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 COL19A1Q14993 1142 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 AMZ1Q400G9 498 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 CRTC2Q53ET0 693 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 HSDL2Q6YN16 418 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 TMPRSS11AQ6ZMR5 421 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 QSOX2Q6ZRP7 698 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 TMPRSS11FQ6ZWK6 438 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 CXXC5Q7LFL8 322 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 ZNF761Q86XN6 746 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 SFTPA2Q8IWL1 248 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 OR52R1Q8NGF1 315 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 OR9A4Q8NGU2 314 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 FANK1Q8TC84 345 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 LMF2Q9BU23 707 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 FBXO34Q9NWN3 711 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 TNFRSF10DQ9UBN6 386 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 SF3B6Q9Y3B4 125 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 CMAHPQ9Y471 501 aa17.78■□□□□ 0.44
PRKCSH-209ENST00000589838 GXYLT2A0PJZ3 443 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 FAM86C2PA6NEL3 165 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 SHISA7A6NL88 538 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 KCNK2O95069 426 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 LYPD3O95274 346 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 CBX7O95931 251 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 PPP1CAP62136 330 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 FLYWCH1Q4VC44 716 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 C22orf42Q6IC83 251 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 TM9SF4Q92544 642 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 AP3S1Q92572 193 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 DPH1Q9BZG8 443 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 FAM60AQ9NP50 221 aa17.77■□□□□ 0.43
PRKCSH-209ENST00000589838 TRDV1A0A1B0GX56 115 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 B4DGG1 531 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 PLD2O14939 933 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 BMP8BP34820 402 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 RPS25P62851 125 aaKnown RBP17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 PSPHP78330 225 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 COL9A2Q14055 689 aaPredicted RBP17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 PRTGQ2VWP7 1150 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 ZNF438Q7Z4V0 828 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 BMP8AQ7Z5Y6 402 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 LHFPL3Q86UP9 236 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 GRAMD2AQ8IUY3 354 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 CPOQ8IVL8 374 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 ZNF485Q8NCK3 441 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 TMEM203Q969S6 136 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 ZNF576Q9H609 170 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 CSNK1G3Q9Y6M4 447 aa17.76■□□□□ 0.43
PRKCSH-209ENST00000589838 NPIPA5A0A0B4J1W7 369 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 NPIPA7E9PJI5 369 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 CTNSO60931 367 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 NPIPA8P0DM63 369 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 GAAP10253 952 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 PAICSP22234 425 aaKnown RBP17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 CTBP2P56545 445 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 STX4Q12846 297 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 CD200R1LQ6Q8B3 271 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 SYT13Q7L8C5 426 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 SHFQ7M4L6 423 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 ZNF595Q8IYB9 648 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 LNX2Q8N448 690 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 ARHGEF39Q8N4T4 335 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 FRMD1Q8N878 549 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 OR4F15Q8NGB8 312 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 SETD6Q8TBK2 473 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 HTRA1Q92743 480 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 SLC35B4Q969S0 331 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 TMCO6Q96DC7 493 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 BPIFA2Q96DR5 249 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 TCTN2Q96GX1 697 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 RBM18Q96H35 190 aaKnown RBP17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 TRIM2Q9C040 744 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 TPK1Q9H3S4 243 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 FOLH1BQ9HBA9 442 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 HINT3Q9NQE9 182 aaKnown RBP17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 IRAK4Q9NWZ3 460 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 ERVK13-1Q9NX77 482 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 TOR4AQ9NXH8 423 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 ZNF217O75362 1048 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 MAKP20794 623 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 ELOCQ15369 112 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 DEFB110Q30KQ9 67 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 LRIT3Q3SXY7 679 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 GARNL3Q5VVW2 1013 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 WDR88Q6ZMY6 472 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 MEPCEQ7L2J0 689 aaKnown RBP17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 SLC43A2Q8N370 569 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 RIT1Q92963 219 aa17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 SECISBP2Q96T21 854 aaKnown RBP17.75■□□□□ 0.43
PRKCSH-209ENST00000589838 LRRC61Q9BV99 259 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms