RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SLC35A4Q96G79 324 aa13.62□□□□□ -0.23
RETREG3-208ENST00000589797 TMEM38AQ9H6F2 299 aa13.62□□□□□ -0.23
RETREG3-208ENST00000589797 METTL7AQ9H8H3 244 aa13.62□□□□□ -0.23
RETREG3-208ENST00000589797 DUX1O43812 170 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 PRSS23O95084 383 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 MT-ND5P03915 603 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 GP2P55259 537 aaKnown RBP13.61□□□□□ -0.23
RETREG3-208ENST00000589797 LIM2P55344 173 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 SLC35A2P78381 396 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 GAS6Q14393 721 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 FAM69BQ5VUD6 431 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 ZER1Q7Z7L7 766 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 MUL1Q969V5 352 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 ZNF559Q9BR84 538 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 PSORS1C1Q9UIG5 152 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 ZNF646O15015 1829 aaPredicted RBP13.61□□□□□ -0.23
RETREG3-208ENST00000589797 TRAV6A0A075B6T7 132 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 IGHV3-20A0A0C4DH32 117 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 SH3D21A4FU49 640 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 ZNF217O75362 1048 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 NCR1O76036 304 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 NTN1O95631 604 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 RENP00797 406 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 GP1BBP13224 206 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 FBLP22087 321 aaKnown RBP13.61□□□□□ -0.23
RETREG3-208ENST00000589797 MNDAP41218 407 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 CSRP3P50461 194 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 CTXN1P60606 82 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 WDR45BQ5MNZ6 344 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 KIAA0895LQ68EN5 471 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 TSSK4Q6SA08 328 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 NUP54Q7Z3B4 507 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 CNOT9Q92600 299 aaKnown RBP13.61□□□□□ -0.23
RETREG3-208ENST00000589797 SGTBQ96EQ0 304 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 TEX101Q9BY14 249 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 CHIAQ9BZP6 476 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 WSB2Q9NYS7 404 aaPredicted RBP13.61□□□□□ -0.23
RETREG3-208ENST00000589797 EXTL2Q9UBQ6 330 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 DAPP1Q9UN19 280 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 ZNF443Q9Y2A4 671 aaPredicted RBP13.61□□□□□ -0.23
RETREG3-208ENST00000589797 LRRN3E7EW58 273 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 SOCS6O14544 535 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 BCAP31P51572 246 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 LSM11P83369 360 aaKnown RBP eCLIP13.61□□□□□ -0.23
RETREG3-208ENST00000589797 ZNF550Q7Z398 422 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 ZNF619Q8N2I2 560 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 SYT14Q8NB59 555 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 SPRYD4Q8WW59 207 aaPredicted RBP13.61□□□□□ -0.23
RETREG3-208ENST00000589797 HS6ST2Q96MM7 605 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 TNFRSF13CQ96RJ3 184 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 GPER1Q99527 375 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 LRRN3Q9H3W5 708 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 SEMA4GQ9NTN9 838 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 PRODH2Q9UF12 536 aa13.61□□□□□ -0.23
RETREG3-208ENST00000589797 YARS2Q9Y2Z4 477 aaKnown RBP13.61□□□□□ -0.23
RETREG3-208ENST00000589797 RGPD4Q7Z3J3 1758 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 TRBV2A0A0J9YWF9 115 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 SLC2A10O95528 541 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 IGHA2P01877 340 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 SPARCP09486 303 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 TDGQ13569 410 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 SEC23BQ15437 767 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 RCBTB1Q8NDN9 531 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 NSMAFQ92636 917 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 MR1Q95460 341 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 TBC1D20Q96BZ9 403 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 OBP2AQ9NY56 170 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 LAMA2P24043 3122 aaKnown RBP13.6□□□□□ -0.23
RETREG3-208ENST00000589797 H7C1C5 153 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 CTSVO60911 334 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 CD97P48960 835 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
RETREG3-208ENST00000589797 LCN6P62502 163 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 RUNX2Q13950 521 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 CALHM3Q86XJ0 350 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 OR51Q1Q8NH59 317 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 SMURF1Q9HCE7 757 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 MYEF2Q9P2K5 600 aaKnown RBP13.6□□□□□ -0.23
RETREG3-208ENST00000589797 WDR90Q96KV7 1748 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 LOC100509620A0A075B734 347 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 MAGEB4O15481 346 aaPredicted RBP13.6□□□□□ -0.23
RETREG3-208ENST00000589797 GABRG2P18507 467 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 CXCL12P48061 93 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 GFERP55789 205 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 RHAGQ02094 409 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 PTCRAQ6ISU1 281 aaPredicted RBP13.6□□□□□ -0.23
RETREG3-208ENST00000589797 MFSD12Q6NUT3 480 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 PGBD2Q6P3X8 592 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 ANKRD13BQ86YJ7 626 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 G6PC3Q9BUM1 346 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 FBRSQ9HAH7 460 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 ZNF221Q9UK13 617 aa13.6□□□□□ -0.23
RETREG3-208ENST00000589797 SLITRK5O94991 958 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 AHSA1O95433 338 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 CLEC2LP0C7M8 214 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 EIF2DP41214 584 aaKnown RBP13.59□□□□□ -0.23
RETREG3-208ENST00000589797 TGM4P49221 684 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 WNT4P56705 351 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 OR1D5P58170 312 aa13.59□□□□□ -0.23
RETREG3-208ENST00000589797 CARD17Q5XLA6 110 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms