RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 QSOX2Q6ZRP7 698 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 PTCHD4Q6ZW05 846 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 AHSA2Q719I0 299 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 RRM2BQ7LG56 351 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 PRICKLE2Q7Z3G6 844 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 ARHGAP22Q7Z5H3 698 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 ZER1Q7Z7L7 766 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 CCDC103Q8IW40 242 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 TMEM151BQ8IW70 566 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 PRSS58Q8IYP2 241 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 ZNF615Q8N8J6 731 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 OR4N2Q8NGD1 307 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 OR4D9Q8NGE8 314 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 OR13F1Q8NGS4 319 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 RHOXF1Q8NHV9 184 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 IFI44Q8TCB0 444 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 MUL1Q969V5 352 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 CLIP3Q96DZ5 547 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 FAM46AQ96IP4 442 aaKnown RBP8.11□□□□□ -1.11
SMAD4-206ENST00000588860 CCDC74BQ96LY2 380 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 SPSB2Q99619 263 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 TUBA1CQ9BQE3 449 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 RHNO1Q9BSD3 238 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 G6PC3Q9BUM1 346 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 GTPBP2Q9BX10 602 aaKnown RBP8.11□□□□□ -1.11
SMAD4-206ENST00000588860 POLR2J2Q9GZM3 115 aaKnown RBP8.11□□□□□ -1.11
SMAD4-206ENST00000588860 LHPPQ9H008 270 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 ANKRD19PQ9H560 264 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 DUSP21Q9H596 190 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 EVA1AQ9H8M9 152 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 CCNB1IP1Q9NPC3 277 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 CLN6Q9NWW5 311 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 PTTG2Q9NZH5 202 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 KCNE5Q9UJ90 142 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 FBXO4Q9UKT5 387 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 SLC7A7Q9UM01 511 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 SLC6A14Q9UN76 642 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 SRPK3Q9UPE1 567 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 OR10H1Q9Y4A9 318 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 COMMD3-BMI1R4GMX3 469 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 R4GN57 208 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 ZFYVE26Q68DK2 2539 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 FRYLO94915 3013 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 CPAMD8Q8IZJ3 1885 aa8.11□□□□□ -1.11
SMAD4-206ENST00000588860 A0A087WUU8 490 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 IGKV3D-11A0A0A0MRZ8 115 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 IGHV5-10-1A0A0J9YXX1 117 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 A0A1W2PQM1 296 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 DCDC2BA2VCK2 349 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 TRAPPC13A5PLN9 417 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 DYRK3O43781 588 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 PIP5K1CO60331 668 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 MPZL2O60487 215 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 MRPS14O60783 128 aaKnown RBP8.1□□□□□ -1.11
SMAD4-206ENST00000588860 BCAS1O75363 584 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-206ENST00000588860 SEC14L2O76054 403 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 FADS2O95864 444 aaKnown RBP8.1□□□□□ -1.11
SMAD4-206ENST00000588860 TP53P04637 393 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-206ENST00000588860 ANKRD34CP0C6C1 535 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 GABRB1P18505 474 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 ITIH1P19827 911 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 PEX19P40855 299 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 MAP2K4P45985 399 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 ZNF136P52737 540 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 NUDT6P53370 316 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 PSMD4P55036 377 aaKnown RBP8.1□□□□□ -1.11
SMAD4-206ENST00000588860 COX10Q12887 443 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 OR1Q1Q15612 314 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 LPAL2Q16609 132 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 VWA2Q5GFL6 755 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 GPR107Q5VW38 600 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 C12orf73Q69YU5 71 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 CASP12Q6UXS9 341 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 CD300LDQ6UXZ3 194 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 CCDC81Q6ZN84 652 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 MED25Q71SY5 747 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 KIF18BQ86Y91 864 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 NKAIN4Q8IVV8 208 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 SVOPQ8N4V2 548 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 IQCF1Q8N6M8 205 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 BCORP1Q8N888 145 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 ZNF321PQ8N8H1 164 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 RCBTB1Q8NDN9 531 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 TEX47Q8TBZ9 253 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 RNF217Q8TC41 542 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 PTPMT1Q8WUK0 201 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-206ENST00000588860 TMEM255BQ8WV15 326 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 ACOT11Q8WXI4 607 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-206ENST00000588860 CNOT9Q92600 299 aaKnown RBP8.1□□□□□ -1.11
SMAD4-206ENST00000588860 MYDGFQ969H8 173 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 ISOC1Q96CN7 298 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 MPP4Q96JB8 637 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 OR6C1Q96RD1 312 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 ZNF559Q9BR84 538 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 COPS4Q9BT78 406 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 OR8D2Q9GZM6 311 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 KRCC1Q9NPI7 259 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-206ENST00000588860 MKKSQ9NPJ1 570 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-206ENST00000588860 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-206ENST00000588860 PLCXD1Q9NUJ7 323 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms