RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 UBQLN4Q9NRR5 601 aa15.18■□□□□ 0.02
TMED1-203ENST00000588259 ACSS1Q9NUB1 689 aaPredicted RBP15.18■□□□□ 0.02
TMED1-203ENST00000588259 ZCCHC3Q9NUD5 404 aaKnown RBP15.18■□□□□ 0.02
TMED1-203ENST00000588259 PAQR5Q9NXK6 330 aaPredicted RBP15.18■□□□□ 0.02
TMED1-203ENST00000588259 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 FAM171A2A8MVW0 826 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 TMEM233B4DJY2 109 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 TRIM13O60858 407 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 NGFRP08138 427 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 ATP6V1C1P21283 382 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 SFTPDP35247 375 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 SERPINB4P48594 390 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 PRIM2P49643 509 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 RNF144AP50876 292 aaPredicted RBP15.17■□□□□ 0.02
TMED1-203ENST00000588259 POU6F2P78424 691 aaPredicted RBP15.17■□□□□ 0.02
TMED1-203ENST00000588259 PDE7AQ13946 482 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.17■□□□□ 0.02
TMED1-203ENST00000588259 SPDYE7PQ495Y7 208 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 PDSS1Q5T2R2 415 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 KANK2Q63ZY3 851 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 Q6ZSR9 355 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 R3HCC1LQ7Z5L2 792 aaKnown RBP15.17■□□□□ 0.02
TMED1-203ENST00000588259 WFDC8Q8IUA0 241 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 LRRC75A-AS1Q8N1F1 130 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 LRRN4CLQ8ND94 238 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 TWIST2Q8WVJ9 160 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 GIMAP5Q96F15 307 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 REXO5Q96IC2 774 aaKnown RBP15.17■□□□□ 0.02
TMED1-203ENST00000588259 NPAS1Q99742 590 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 TUBB1Q9H4B7 451 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 FBXO34Q9NWN3 711 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 GIN1Q9NXP7 522 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 TMED5Q9Y3A6 229 aa15.17■□□□□ 0.02
TMED1-203ENST00000588259 NUP214P35658 2090 aaPredicted RBP15.16■□□□□ 0.02
TMED1-203ENST00000588259 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.16■□□□□ 0.02
TMED1-203ENST00000588259 TLDC2A0PJX2 215 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 TMEM114B3SHH9 223 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 NPIPB8E9PQR5 432 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 PIP5K1BO14986 540 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 LSM1O15116 133 aaKnown RBP15.16■□□□□ 0.02
TMED1-203ENST00000588259 TBX19O60806 448 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 SS18L1O75177 396 aaPredicted RBP15.16■□□□□ 0.02
TMED1-203ENST00000588259 HEXAP06865 529 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 CHRNGP07510 517 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 BCKDHAP12694 445 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 PPP3CBP16298 524 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 MAP3K8P41279 467 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 RAC1P63000 192 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 TP53BP2Q13625 1128 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 LASP1Q14847 261 aaKnown RBP15.16■□□□□ 0.02
TMED1-203ENST00000588259 BEX5Q5H9J7 111 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 CPTPQ5TA50 214 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 ESPNLQ6ZVH7 1005 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 TDRPQ86YL5 185 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 MISPQ8IVT2 679 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 B4GALNT2Q8NHY0 566 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 PHOSPHO1Q8TCT1 267 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 ACTRT2Q8TDY3 377 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 HOXB13Q92826 284 aaPredicted RBP15.16■□□□□ 0.02
TMED1-203ENST00000588259 CDS1Q92903 461 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 FCRL1Q96LA6 429 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 BTBD2Q9BX70 525 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 ACTR6Q9GZN1 396 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 GIMAP2Q9UG22 337 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 DNAJC15Q9Y5T4 150 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 PRR14LQ5THK1 2151 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 USF3Q68DE3 2245 aa15.16■□□□□ 0.02
TMED1-203ENST00000588259 RAI1Q7Z5J4 1906 aaPredicted RBP15.15■□□□□ 0.02
TMED1-203ENST00000588259 JMJD1CQ15652 2540 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 A0A0J9YW62 118 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 C7orf72A4D263 438 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 SCAMP2O15127 329 aaKnown RBP15.15■□□□□ 0.02
TMED1-203ENST00000588259 LY6G6DO95868 133 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 HMGN2P05204 90 aaKnown RBP15.15■□□□□ 0.02
TMED1-203ENST00000588259 TUBBP07437 444 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 MAPK1P28482 360 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 FOXF1Q12946 379 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 CD226Q15762 336 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 CTU2Q2VPK5 515 aaKnown RBP15.15■□□□□ 0.02
TMED1-203ENST00000588259 ZCCHC12Q6PEW1 402 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 STAC2Q6ZMT1 411 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 BEND4Q6ZU67 534 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 C22orf34Q6ZV56 151 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 PLEKHM3Q6ZWE6 761 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 LILRA2Q8N149 483 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 CIARTQ8N365 385 aaPredicted RBP15.15■□□□□ 0.02
TMED1-203ENST00000588259 ZNF614Q8N883 585 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 ZNF527Q8NB42 609 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 ATP6V1C2Q8NEY4 427 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 OR7A2PQ8NGA2 310 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 ROBO4Q8WZ75 1007 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 OSTF1Q92882 214 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 MTERF3Q96E29 417 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 FAM120BQ96EK7 910 aaKnown RBP15.15■□□□□ 0.02
TMED1-203ENST00000588259 APOPT1Q96IL0 206 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 COX4I2Q96KJ9 171 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 MARK4Q96L34 752 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 KLHL15Q96M94 604 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 KLHDC3Q9BQ90 382 aa15.15■□□□□ 0.02
TMED1-203ENST00000588259 BDH2Q9BUT1 245 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms