RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 PHF10Q8WUB8 498 aaKnown RBP10.37□□□□□ -0.75
VMP1-207ENST00000588131 KCNE4Q8WWG9 221 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 OIT3Q8WWZ8 545 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 FGF11Q92914 225 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 MARVELD3Q96A59 401 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 CENPNQ96H22 339 aaPredicted RBP10.37□□□□□ -0.75
VMP1-207ENST00000588131 FER1L6-AS2Q96M78 137 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 ZNF347Q96SE7 839 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 MFRPQ9BY79 579 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 ATP13A2Q9NQ11 1180 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 CTPS2Q9NRF8 586 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 KLHL28Q9NXS3 571 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 RHCGQ9UBD6 479 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 A4GNTQ9UNA3 340 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 YARS2Q9Y2Z4 477 aaKnown RBP10.37□□□□□ -0.75
VMP1-207ENST00000588131 TESMINQ9Y4I5 508 aa10.37□□□□□ -0.75
VMP1-207ENST00000588131 A0A1W2PQD3 144 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 ALG1L2C9J202 215 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 GNGT2O14610 69 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 AP3D1O14617 1153 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 EFSO43281 561 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 SCO2O43819 266 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 CSTAP01040 98 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 CAPNS1P04632 268 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 UBTFL6P0CB48 400 aaPredicted RBP10.36□□□□□ -0.75
VMP1-207ENST00000588131 HPGDP15428 266 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 ITGA2P17301 1181 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 RHCEP18577 417 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 HTR2AP28223 471 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 EVI2BP34910 448 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 GCKP35557 465 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 ADH7P40394 386 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 SSR4P51571 173 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 SPIBQ01892 262 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 CDC20Q12834 499 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 AIMP2Q13155 320 aaKnown RBP10.36□□□□□ -0.75
VMP1-207ENST00000588131 NTRK2Q16620 822 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 ZNF468Q5VIY5 522 aaPredicted RBP10.36□□□□□ -0.75
VMP1-207ENST00000588131 JMJD6Q6NYC1 403 aaPredicted RBP10.36□□□□□ -0.75
VMP1-207ENST00000588131 NUP54Q7Z3B4 507 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 GRAMD2AQ8IUY3 354 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 CMIPQ8IY22 773 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 HS3ST5Q8IZT8 346 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 ZNF248Q8NDW4 579 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 FAM71CQ8NEG0 241 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 OR10G3Q8NGC4 313 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 PHOSPHO1Q8TCT1 267 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 GRHL3Q8TE85 626 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 RNF138Q8WVD3 245 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 ASB15Q8WXK1 588 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 SPACA9Q96E40 222 aaPredicted RBP10.36□□□□□ -0.75
VMP1-207ENST00000588131 BARD1Q99728 777 aaKnown RBP10.36□□□□□ -0.75
VMP1-207ENST00000588131 PIP5K1AQ99755 562 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 CIB1Q99828 191 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 BDH2Q9BUT1 245 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 ACAD8Q9UKU7 415 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 OAZ3Q9UMX2 235 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 SLC35A3Q9Y2D2 325 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 MAGED1Q9Y5V3 778 aaPredicted RBP10.36□□□□□ -0.75
VMP1-207ENST00000588131 U3KQV3 271 aa10.36□□□□□ -0.75
VMP1-207ENST00000588131 AHCTF1Q8WYP5 2266 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 CPSF4LA6NMK7 179 aaKnown RBP10.35□□□□□ -0.75
VMP1-207ENST00000588131 ZNF891A8MT65 544 aaPredicted RBP10.35□□□□□ -0.75
VMP1-207ENST00000588131 PDLIM1O00151 329 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 KLK10O43240 276 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 DPM1O60762 260 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 CYP7B1O75881 506 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 ANGPTL1O95841 491 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 UBL4AP11441 157 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 ITGA3P26006 1051 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 PTGDSP41222 190 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 ACAA2P42765 397 aaKnown RBP10.35□□□□□ -0.75
VMP1-207ENST00000588131 TMED10P49755 219 aaKnown RBP10.35□□□□□ -0.75
VMP1-207ENST00000588131 GAS1P54826 345 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 CDH12P55289 794 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 ZNF117Q03924 483 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 FOXD4Q12950 439 aaPredicted RBP10.35□□□□□ -0.75
VMP1-207ENST00000588131 SKP2Q13309 424 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 PIN1Q13526 163 aaPredicted RBP10.35□□□□□ -0.75
VMP1-207ENST00000588131 LAPTM4AQ15012 233 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 MEP1AQ16819 746 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 ENTPD8Q5MY95 495 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 ACER2Q5QJU3 275 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 BICRALQ6AI39 1079 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 TBPL2Q6SJ96 375 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 OPN5Q6U736 354 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 CBLN3Q6UW01 205 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 IL20RBQ6UXL0 311 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 CYP4Z1Q86W10 505 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 BEST3Q8N1M1 668 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 CLEC1AQ8NC01 280 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 PIK3C3Q8NEB9 887 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 OR4C15Q8NGM1 316 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 SNIP1Q8TAD8 396 aaKnown RBP10.35□□□□□ -0.75
VMP1-207ENST00000588131 THAP4Q8WY91 577 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 TTC9Q92623 222 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 TMCO6Q96DC7 493 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 DHRS1Q96LJ7 313 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 PRRC1Q96M27 445 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 MCHR1Q99705 422 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms