RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 SCDO00767 359 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 SOX30O94993 753 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 SNUPNO95149 360 aaKnown RBP11.86□□□□□ -0.51
H3F3B-205ENST00000587171 GOSR1O95249 250 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 HPGDP15428 266 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 CD1EP15812 388 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 KIR2DL2P43627 348 aaPredicted RBP11.86□□□□□ -0.51
H3F3B-205ENST00000587171 ART1P52961 327 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 IST1P53990 364 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 CLDN8P56748 225 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 ABCE1P61221 599 aaKnown RBP11.86□□□□□ -0.51
H3F3B-205ENST00000587171 RPS3AP61247 264 aaKnown RBP11.86□□□□□ -0.51
H3F3B-205ENST00000587171 TP53BP2Q13625 1128 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 PON3Q15166 354 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 CD226Q15762 336 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 PDCD2Q16342 344 aaPredicted RBP11.86□□□□□ -0.51
H3F3B-205ENST00000587171 VWA1Q6PCB0 445 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 GGNQ86UU5 652 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 GTPBP8Q8N3Z3 284 aaPredicted RBP11.86□□□□□ -0.51
H3F3B-205ENST00000587171 FNDC9Q8TBE3 224 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 SMPDL3BQ92485 455 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 ZBTB8AQ96BR9 441 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 MOAP1Q96BY2 351 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 STARD4Q96DR4 205 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 CHMP6Q96FZ7 201 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 ZNF845Q96IR2 970 aaPredicted RBP11.86□□□□□ -0.51
H3F3B-205ENST00000587171 SORT1Q99523 831 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 DUSP26Q9BV47 211 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 LIME1Q9H400 295 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 RNF122Q9H9V4 155 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 MED17Q9NVC6 651 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 ST6GALNAC2Q9UJ37 374 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.86□□□□□ -0.51
H3F3B-205ENST00000587171 RAP2CQ9Y3L5 183 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 ACTL7BQ9Y614 415 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 PRR14LQ5THK1 2151 aa11.86□□□□□ -0.51
H3F3B-205ENST00000587171 FREM1Q5H8C1 2179 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 KRT16P08779 473 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 MYZAPP0CAP1 466 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 PSMA4P25789 261 aaKnown RBP11.85□□□□□ -0.51
H3F3B-205ENST00000587171 PCYT1AP49585 367 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 HBA1P69905 142 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 MPP2Q14168 576 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 GUSBP1Q15486 140 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 PLPPR5Q32ZL2 321 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 SPDYE7PQ495Y7 208 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 CEP85LQ5SZL2 805 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 DCST2Q5T1A1 773 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 CNEP1R1Q8N9A8 125 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 ADAMTS15Q8TE58 950 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 ADGRG7Q96K78 797 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 DACH2Q96NX9 599 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 NPAS1Q99742 590 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 KLHDC3Q9BQ90 382 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 CXXC4Q9H2H0 198 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 AKTIPQ9H8T0 292 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 STOML1Q9UBI4 398 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 HAO1Q9UJM8 370 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 FAF1Q9UNN5 650 aaPredicted RBP11.85□□□□□ -0.51
H3F3B-205ENST00000587171 KCNE3Q9Y6H6 103 aa11.85□□□□□ -0.51
H3F3B-205ENST00000587171 SH3D21A4FU49 640 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 NPIPB9F8W1W9 429 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 CFLARO15519 480 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 SMNDC1O75940 238 aaKnown RBP eCLIP11.84□□□□□ -0.514e-10■■□□□ 11.6
H3F3B-205ENST00000587171 CGAP01215 116 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 TUBBP07437 444 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 FCGR2AP12318 317 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 ATP6V1C1P21283 382 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 CPOXP36551 454 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 SLC1A6P48664 564 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 RPL14P50914 215 aaKnown RBP11.84□□□□□ -0.51
H3F3B-205ENST00000587171 ZNF41P51814 821 aaPredicted RBP11.84□□□□□ -0.51
H3F3B-205ENST00000587171 CTU2Q2VPK5 515 aaKnown RBP11.84□□□□□ -0.51
H3F3B-205ENST00000587171 BTLAQ7Z6A9 289 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 MTERF4Q7Z6M4 381 aaKnown RBP11.84□□□□□ -0.51
H3F3B-205ENST00000587171 CROCCP2Q86T23 111 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 KIRREL3Q8IZU9 778 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 ZNF527Q8NB42 609 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 OR8J2Q8NGG1 315 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 OR5AK3PQ8NH89 298 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 B4GALNT2Q8NHY0 566 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 PGM2Q96G03 612 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 SH3YL1Q96HL8 342 aaPredicted RBP11.84□□□□□ -0.51
H3F3B-205ENST00000587171 PPP1R36Q96LQ0 422 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 RNF145Q96MT1 663 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 FOXC2Q99958 501 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 HOXD1Q9GZZ0 328 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 CENPHQ9H3R5 247 aa11.84□□□□□ -0.51
H3F3B-205ENST00000587171 CCM2LQ9NUG4 571 aaPredicted RBP11.84□□□□□ -0.51
H3F3B-205ENST00000587171 NIPBLQ6KC79 2804 aaeCLIP11.84□□□□□ -0.51
H3F3B-205ENST00000587171 NPIPA5A0A0B4J1W7 369 aa11.83□□□□□ -0.52
H3F3B-205ENST00000587171 NPIPA7E9PJI5 369 aa11.83□□□□□ -0.52
H3F3B-205ENST00000587171 RNASET2O00584 256 aaKnown RBP11.83□□□□□ -0.52
H3F3B-205ENST00000587171 EIF1AYO14602 144 aaKnown RBP11.83□□□□□ -0.52
H3F3B-205ENST00000587171 ADAMDEC1O15204 470 aa11.83□□□□□ -0.52
H3F3B-205ENST00000587171 AQP8O94778 261 aa11.83□□□□□ -0.52
H3F3B-205ENST00000587171 HRGP04196 525 aa11.83□□□□□ -0.52
H3F3B-205ENST00000587171 LINGO3P0C6S8 592 aa11.83□□□□□ -0.52
H3F3B-205ENST00000587171 NPIPA8P0DM63 369 aa11.83□□□□□ -0.52
H3F3B-205ENST00000587171 CD8BP10966 210 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms