RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 FRKP42685 505 aaPredicted RBP12.89□□□□□ -0.35
SDF2-202ENST00000585428 NAA20P61599 178 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 RPS4XP62701 263 aaKnown RBP12.89□□□□□ -0.35
SDF2-202ENST00000585428 ZNF844Q08AG5 666 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 ETFDHQ16134 617 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 IMPG1Q17R60 797 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 EXOSC6Q5RKV6 272 aaKnown RBP12.89□□□□□ -0.35
SDF2-202ENST00000585428 NCMAPQ5T1S8 102 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 PPP4R4Q6NUP7 873 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 LILRA2Q8N149 483 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 CCNYL1Q8N7R7 359 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 NOA1Q8NC60 698 aaKnown RBP12.89□□□□□ -0.35
SDF2-202ENST00000585428 NUP43Q8NFH3 380 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 ROBO4Q8WZ75 1007 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 ANP32BQ92688 251 aaKnown RBP12.89□□□□□ -0.35
SDF2-202ENST00000585428 S100PBPQ96BU1 408 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 CCDC126Q96EE4 140 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 REG4Q9BYZ8 158 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 EQTNQ9NQ60 294 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 RRAGDQ9NQL2 400 aaPredicted RBP12.89□□□□□ -0.35
SDF2-202ENST00000585428 UBQLN4Q9NRR5 601 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 EMCNQ9ULC0 261 aa12.89□□□□□ -0.35
SDF2-202ENST00000585428 A0A1W2PQD3 144 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 GOLGA8RI6L899 631 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 SEC22BO75396 215 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 NTN1O95631 604 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 ACP2P11117 423 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 ADH6P28332 368 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 IDUAP35475 653 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 ZNF41P51814 821 aaPredicted RBP12.88□□□□□ -0.35
SDF2-202ENST00000585428 PRKAG1P54619 331 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 MANFP55145 182 aaKnown RBP12.88□□□□□ -0.35
SDF2-202ENST00000585428 HSPB3Q12988 150 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 WHAMMP3Q1A5X7 153 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 PDSS1Q5T2R2 415 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 SFRP5Q5T4F7 317 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 ZCCHC12Q6PEW1 402 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 DNM1P46Q6ZS02 220 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 NUFIP2Q7Z417 695 aaKnown RBP12.88□□□□□ -0.35
SDF2-202ENST00000585428 TUSC5Q8IXB3 177 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 GATSQ8NAP1 163 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 MAPK1IP1LQ8NDC0 245 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 OR6Y1Q8NGX8 325 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 RNF128Q8TEB7 428 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 MZB1Q8WU39 189 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 SMAP2Q8WU79 429 aaPredicted RBP12.88□□□□□ -0.35
SDF2-202ENST00000585428 HSD17B8Q92506 261 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 CIDECQ96AQ7 238 aaPredicted RBP12.88□□□□□ -0.35
SDF2-202ENST00000585428 TRMT61AQ96FX7 289 aaKnown RBP12.88□□□□□ -0.35
SDF2-202ENST00000585428 C12orf49Q9H741 205 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.88□□□□□ -0.35
SDF2-202ENST00000585428 HEATR5AQ86XA9 2040 aa12.88□□□□□ -0.35
SDF2-202ENST00000585428 UQCRHLA0A096LP55 91 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 PDPK1O15530 556 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 URI1O94763 535 aaPredicted RBP12.87□□□□□ -0.35
SDF2-202ENST00000585428 PABPC4LP0CB38 370 aaKnown RBP12.87□□□□□ -0.35
SDF2-202ENST00000585428 UROSP10746 265 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 ME2P23368 584 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 SHC1P29353 583 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 EIF1P41567 113 aaKnown RBP12.87□□□□□ -0.35
SDF2-202ENST00000585428 DNAJB13P59910 316 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 RNPS1Q15287 305 aaKnown RBP12.87□□□□□ -0.35
SDF2-202ENST00000585428 TSC22D1Q15714 1073 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 TAB1Q15750 504 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 CD226Q15762 336 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 ZNF239Q16600 458 aaKnown RBP12.87□□□□□ -0.35
SDF2-202ENST00000585428 DUSP5Q16690 384 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 ZNF385BQ569K4 471 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 ANKRD26P1Q6NSI1 321 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 FIGNL1Q6PIW4 674 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 TFAP2EQ6VUC0 442 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 ZYG11AQ6WRX3 759 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 Q6ZSR9 355 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 FRMD7Q6ZUT3 714 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 MISPQ8IVT2 679 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 B4GALNT2Q8NHY0 566 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 PIWIL2Q8TC59 973 aaKnown RBP12.87□□□□□ -0.35
SDF2-202ENST00000585428 C16orf58Q96GQ5 468 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 FCRL1Q96LA6 429 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 KLHL15Q96M94 604 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 IQCGQ9H095 443 aaKnown RBP12.87□□□□□ -0.35
SDF2-202ENST00000585428 REEP4Q9H6H4 257 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 TMEM185BQ9H7F4 350 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 GP6Q9HCN6 339 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 ACSS1Q9NUB1 689 aaPredicted RBP12.87□□□□□ -0.35
SDF2-202ENST00000585428 RNF115Q9Y4L5 304 aa12.87□□□□□ -0.35
SDF2-202ENST00000585428 COL6A5A8TX70 2615 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 A0A1W2PPM1 405 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 DPRXA6NFQ7 191 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 ZNF814B7Z6K7 855 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 ZNF195O14628 629 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 RIPK2O43353 540 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 PRKD3O94806 890 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 CD8AP01732 235 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 YES1P07947 543 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 GPC1P35052 558 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 SERPINB4P48594 390 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 PRIM2P49643 509 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 PDE7AQ13946 482 aa12.86□□□□□ -0.35
SDF2-202ENST00000585428 P2RY6Q15077 328 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms