RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 A0A0G2JMP0 313 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 A0A0X1KG70 313 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 KCNJ13O60928 360 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PTNP21246 168 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 VEGFBP49765 207 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 EEF1A1P68104 462 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 DUSP8Q13202 625 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ZNF57Q68EA5 555 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MTSS1LQ765P7 747 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 VN1R4Q7Z5H5 301 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 LRRC28Q86X40 367 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OR2L13Q8N349 312 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 HDDC3Q8N4P3 179 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OR4M2Q8NGB6 313 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OR5M3Q8NGP4 307 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 COL26A1Q96A83 441 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CREB3L1Q96BA8 519 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PAWRQ96IZ0 340 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CYSLTR2Q9NS75 346 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MCUBQ9NWR8 336 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CENPVL1A0A0U1RR11 272 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 UNC119BA6NIH7 251 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 BHLHE40O14503 412 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CPNE3O75131 537 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CHRNB1P11230 501 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CLDN2P57739 230 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ZFPM2Q8WW38 1151 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 GAL3ST3Q96A11 431 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 AHCYL2Q96HN2 611 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ART5Q96L15 291 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 DPH1Q9BZG8 443 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CACYBPQ9HB71 228 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SIDT1Q9NXL6 827 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 DPP7Q9UHL4 492 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ZNF223Q9UK11 482 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 GPSM3Q9Y4H4 160 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 A0A1W2PP55 124 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ZC3H12DA2A288 527 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 INMT-MINDY4F8WBC2 141 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ZNF780AO75290 641 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 THBS1P07996 1170 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 F8A1P23610 371 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SLC6A1P30531 599 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 WASP42768 502 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 AGFG1P52594 562 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 GNG2P59768 71 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 DUSP5Q16690 384 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 EIPR1Q53HC9 387 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 PRPF38BQ5VTL8 546 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 RANBP3LQ86VV4 465 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TMEM99Q8N816 258 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 OR52L1Q8NGH7 329 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 FANK1Q8TC84 345 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 KCTD12Q96CX2 325 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CD180Q99467 661 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SDF2Q99470 211 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 GTPBP2Q9BX10 602 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ENKD1Q9H0I2 346 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 PPIL3Q9H2H8 161 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 MED20Q9H944 212 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TRIM36Q9NQ86 728 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 MOSPD1Q9UJG1 213 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 STON1Q9Y6Q2 735 aa13.2□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TRAPPC13A5PLN9 417 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 KAT7O95251 611 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ZNF888P0CJ79 500 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 C5AR1P21730 350 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TBXA2RP21731 343 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TNFRSF17Q02223 184 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 GALEQ14376 348 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 C2orf27AQ580R0 203 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 WDR88Q6ZMY6 472 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 DGLUCYQ7Z3D6 616 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ADGRD2Q7Z7M1 963 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 PAQR7Q86WK9 346 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SAMD14Q8IZD0 417 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 RNF113BQ8IZP6 322 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 LNX2Q8N448 690 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 KISS1RQ969F8 398 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 GFM1Q96RP9 751 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 HCAR1Q9BXC0 346 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 KIR3DX1Q9H7L2 352 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SCN3AQ9NY46 2000 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 DAPL1A0PJW8 107 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 HRO43593 1189 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 PLOD3O60568 738 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 PRG2P13727 222 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 BMP7P18075 431 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CD53P19397 219 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 FUT1P19526 365 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 MAKP20794 623 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 HTR2AP28223 471 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 GJA4P35212 333 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 THBS2P35442 1172 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 RFX3P48380 749 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ATP12AP54707 1039 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SNRPNP63162 240 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 MAB21L1Q13394 359 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 GPR176Q14439 515 aa13.19□□□□□ -0.3
CDK5RAP3-237ENST00000585163 VITQ6UXI7 678 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms