RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 DHRS4L1P0CG22 281 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 TSPAN8P19075 237 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 CRABP2P29373 138 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 ZNF41P51814 821 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 ILF2Q12905 390 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 RNPS1Q15287 305 aaKnown RBP12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 PLPPR5Q32ZL2 321 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 CPTPQ5TA50 214 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 TMEM107Q6UX40 140 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 TMEM108Q6UXF1 575 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 RINLQ6ZS11 566 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 Q6ZT83 130 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 TDRPQ86YL5 185 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 LILRA2Q8N149 483 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 ATP6V1C2Q8NEY4 427 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 OR4F6Q8NGB9 312 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 SGMS2Q8NHU3 365 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 SELENOMQ8WWX9 145 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 ZMYND19Q96E35 227 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 PHF21BQ96EK2 531 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 FOXN4Q96NZ1 517 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 BBS4Q96RK4 519 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 C1QTNF6Q9BXI9 259 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 CXorf36Q9H7Y0 433 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 Q9N2J8 555 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 ATP23Q9Y6H3 246 aa12.46□□□□□ -0.41
CSNK1D-224ENST00000584672 ARFGEF3Q5TH69 2177 aa12.46□□□□□ -0.42
CSNK1D-224ENST00000584672 HEATR1Q9H583 2144 aaKnown RBP12.46□□□□□ -0.42
CSNK1D-224ENST00000584672 A0A087WZY1 265 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 LRP5LA4QPB2 252 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 FAM159BA6NKW6 160 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 RAD51DO75771 328 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 PRKD3O94806 890 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 GGT1P19440 569 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 IGHV1-2P23083 117 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 OR3A2P47893 321 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 PRR5P85299 388 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 DR1Q01658 176 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 SLC18A2Q05940 514 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 PDLIM3Q53GG5 364 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 TCHHL1Q5QJ38 904 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 TIMM23BQ5SRD1 257 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 GRTP1Q5TC63 336 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 CDC26Q8NHZ8 85 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 RHEBL1Q8TAI7 183 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 PIK3R3Q92569 461 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 CPNE4Q96A23 557 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 ZBTB8AQ96BR9 441 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 MRRFQ96E11 262 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 RADILQ96JH8 1075 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 SORCS2Q96PQ0 1159 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 USB1Q9BQ65 265 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 SLC35C2Q9NQQ7 365 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 DMGDHQ9UI17 866 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 PCTPQ9UKL6 214 aa12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 TNPO3Q9Y5L0 923 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-224ENST00000584672 GNG14A0A1W2PPG7 69 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 OR5H1A6NKK0 313 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 PPP6CO00743 305 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 IGHV3-9P01782 118 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 CHN1P15882 459 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 ENPP1P22413 925 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 CD40P25942 277 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 GABRA3P34903 492 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 RNF144AP50876 292 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 NCBP2P52298 156 aaKnown RBP eCLIP12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 MANFP55145 182 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 TRA2BP62995 288 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 CHRNB3Q05901 458 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 FOXF1Q12946 379 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 PRSS53Q2L4Q9 553 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 FAM83EQ2M2I3 478 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 ANKS4BQ8N8V4 417 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 FBXO17Q96EF6 278 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 TRMOQ9BU70 441 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 BHLHE41Q9C0J9 482 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 BPESC1Q9GZL8 116 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 EQTNQ9NQ60 294 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 TIGARQ9NQ88 270 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 TMEFF2Q9UIK5 374 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 MRTO4Q9UKD2 239 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 MGAT4BQ9UQ53 548 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 TRAF6Q9Y4K3 522 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 PMF1-BGLAPU3KQ54 211 aa12.44□□□□□ -0.42
CSNK1D-224ENST00000584672 GOLGA6L6A8MZA4 724 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 PCDH7O60245 1069 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 OXSR1O95747 527 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 C2P06681 752 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 CREB1P16220 341 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 ZNF23P17027 643 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 CDC25BP30305 580 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 IL2RGP31785 369 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 MPIP34949 423 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 PRIM2P49643 509 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 PSMD4P55036 377 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 RAE1P78406 368 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 MRPS25P82663 173 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 ZNHIT3Q15649 155 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 TMEM176BQ3YBM2 270 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 LETMD1Q6P1Q0 360 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms