RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	C1orf109	Q9NX04	203 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732	BAIAP2L1	Q9UHR4	511 aa		13.54	□□□□□ -0.24
SREBF1-222	ENST00000583732		H3BQF6	201 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	SCD	O00767	359 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	IFI6	P09912	130 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	ALOX5	P09917	674 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	PPP3CB	P16298	524 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	IL11	P20809	199 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	SHC1	P29353	583 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	AGTR1	P30556	359 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	MAP3K8	P41279	467 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	PRIM2	P49643	509 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	RAC1	P63000	192 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	TSC22D1	Q15714	1073 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	CCDC153	Q494R4	210 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	GALNTL6	Q49A17	601 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	MFSD12	Q6NUT3	480 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	BEND4	Q6ZU67	534 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	POC1B	Q8TC44	478 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	HOXB13	Q92826	284 aa	Predicted RBP	13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	PAQR5	Q9NXK6	330 aa	Predicted RBP	13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	GIN1	Q9NXP7	522 aa		13.53	□□□□□ -0.24
SREBF1-222	ENST00000583732	NPIPA5	A0A0B4J1W7	369 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	NPIPA7	E9PJI5	369 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	AZIN1	O14977	448 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	NTN1	O95631	604 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	SHBG	P04278	402 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	TUBB	P07437	444 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	LINC00032	P0C843	101 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	NPIPA8	P0DM63	369 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	CPA3	P15088	417 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	ME2	P23368	584 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	PRPH2	P23942	346 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	PSMA4	P25789	261 aa	Known RBP	13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	ATP5J2	P56134	94 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	DNAJB13	P59910	316 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	NAA20	P61599	178 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZNF844	Q08AG5	666 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	FOXF1	Q12946	379 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	CD226	Q15762	336 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	CPTP	Q5TA50	214 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	LIPM	Q5VYY2	423 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	ESPNL	Q6ZVH7	1005 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	STK32C	Q86UX6	486 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZNF619	Q8N2I2	560 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	OR6Y1	Q8NGX8	325 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	B4GALNT2	Q8NHY0	566 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	OSTF1	Q92882	214 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	KLHL15	Q96M94	604 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	CCT7	Q99832	543 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	TXLNGY	Q9BZA5	131 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	IQCG	Q9H095	443 aa	Known RBP	13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	CXorf56	Q9H5V9	222 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	FANCF	Q9NPI8	374 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	OXSM	Q9NWU1	459 aa		13.52	□□□□□ -0.25
SREBF1-222	ENST00000583732	COPE	O14579	308 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	HS3ST1	O14792	307 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	OIP5	O43482	229 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	NUDT14	O95848	222 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	NGFR	P08138	427 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	POU6F2	P78424	691 aa	Predicted RBP	13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZNF117	Q03924	483 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	LASP1	Q14847	261 aa	Known RBP	13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZNF239	Q16600	458 aa	Known RBP	13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	RFTN2	Q52LD8	501 aa	Predicted RBP	13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	PDSS1	Q5T2R2	415 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732		Q6ZSR9	355 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	SH2D5	Q6ZV89	423 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	LILRA2	Q8N149	483 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	C4orf33	Q8N1A6	199 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	ATP6V1C2	Q8NEY4	427 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	RAB3IL1	Q8TBN0	382 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	FAM110B	Q8TC76	370 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	PHOSPHO1	Q8TCT1	267 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	ABHD3	Q8WU67	409 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	IGFBPL1	Q8WX77	278 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	CDS1	Q92903	461 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	S100PBP	Q96BU1	408 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	FCRL1	Q96LA6	429 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	MDFI	Q99750	246 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	TACO1	Q9BSH4	297 aa	Known RBP	13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	SRXN1	Q9BYN0	137 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	TUBB1	Q9H4B7	451 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	UBQLN4	Q9NRR5	601 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	GLRX2	Q9NS18	164 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	GIMAP2	Q9UG22	337 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	LAMP3	Q9UQV4	416 aa		13.51	□□□□□ -0.25
SREBF1-222	ENST00000583732	C7orf72	A4D263	438 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	TMEM233	B4DJY2	109 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	NPIPB8	E9PQR5	432 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	ADAMDEC1	O15204	470 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	CLOCK	O15516	846 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	LINGO3	P0C6S8	592 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	NEFH	P12036	1026 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	FRK	P42685	505 aa	Predicted RBP	13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	SERPINB4	P48594	390 aa		13.5	□□□□□ -0.25
SREBF1-222	ENST00000583732	CCT5	P48643	541 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms