RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 TMEM163Q8TC26 289 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 NACC2Q96BF6 587 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 MED30Q96HR3 178 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 GAS2L1Q99501 681 aaPredicted RBP12.72□□□□□ -0.37
SRSF1-205ENST00000582730 ZNF576Q9H609 170 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 RANGRFQ9HD47 186 aaPredicted RBP12.72□□□□□ -0.37
SRSF1-205ENST00000582730 FAM60AQ9NP50 221 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 RPRD1BQ9NQG5 326 aaKnown RBP12.72□□□□□ -0.37
SRSF1-205ENST00000582730 SNTG1Q9NSN8 517 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 TRAPPC4Q9Y296 219 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 CRYZL1O95825 349 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 TSPAN19P0C672 248 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 GABRA3P34903 492 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 YIF1BQ5BJH7 314 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 RANBP3LQ86VV4 465 aaPredicted RBP12.72□□□□□ -0.37
SRSF1-205ENST00000582730 ANKK1Q8NFD2 765 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 SUN5Q8TC36 379 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 TEX12Q9BXU0 123 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 PRRG3Q9BZD7 231 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 MMP28Q9H239 520 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 C19orf53Q9UNZ5 99 aaPredicted RBP12.72□□□□□ -0.37
SRSF1-205ENST00000582730 LSM2Q9Y333 95 aaKnown RBP12.72□□□□□ -0.37
SRSF1-205ENST00000582730 PCDHGB2Q9Y5G2 931 aa12.72□□□□□ -0.37
SRSF1-205ENST00000582730 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.71□□□□□ -0.37
SRSF1-205ENST00000582730 SNTNA6NMZ2 147 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 PRODHO43272 600 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 STX11O75558 287 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 GPR75O95800 540 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 THY1P04216 161 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 CT62P0C5K7 136 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 AZGP1P25311 298 aaKnown RBP12.71□□□□□ -0.37
SRSF1-205ENST00000582730 MTNR1AP48039 350 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 CDH11P55287 796 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 UBE2IP63279 158 aaKnown RBP12.71□□□□□ -0.37
SRSF1-205ENST00000582730 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.71□□□□□ -0.37
SRSF1-205ENST00000582730 BAK1Q16611 211 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 MRPL2Q5T653 305 aaKnown RBP12.71□□□□□ -0.37
SRSF1-205ENST00000582730 RASSF6Q6ZTQ3 369 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 NOXA1Q86UR1 476 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 SIX5Q8N196 739 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 AVL9Q8NBF6 648 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 PROKR2Q8NFJ6 384 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 SETD6Q8TBK2 473 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 ZDHHC1Q8WTX9 485 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 GATAD2BQ8WXI9 593 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 TAPBPLQ9BX59 468 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 BEX2Q9BXY8 128 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 PIGUQ9H490 435 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 LYRM4Q9HD34 91 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 CRNNQ9UBG3 495 aaPredicted RBP12.71□□□□□ -0.37
SRSF1-205ENST00000582730 SPTBP11277 2137 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 KIR2DS5A0A0G2JLQ3 304 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 A0A0G2JNG1 304 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 SMIM30A4D0T7 59 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 KIR2DS3K7RE56 304 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 ICMTO60725 284 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 GALR3O60755 368 aaPredicted RBP12.71□□□□□ -0.37
SRSF1-205ENST00000582730 FUT1P19526 365 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 MAZP56270 477 aaKnown RBP12.71□□□□□ -0.37
SRSF1-205ENST00000582730 FZD2Q14332 565 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 KIR2DS5Q14953 304 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 EIPR1Q53HC9 387 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 SMARCD3Q6STE5 483 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 CA13Q8N1Q1 262 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 ZFP41Q8N8Y5 198 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 GRPEL2Q8TAA5 225 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 NR4A3Q92570 626 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 TRIM63Q969Q1 353 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 TRMT61AQ96FX7 289 aaKnown RBP12.71□□□□□ -0.37
SRSF1-205ENST00000582730 C2orf42Q9NWW7 574 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 HCN3Q9P1Z3 774 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 NUFIP1Q9UHK0 495 aaKnown RBP12.71□□□□□ -0.37
SRSF1-205ENST00000582730 SSR3Q9UNL2 185 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 DIMT1Q9UNQ2 313 aaKnown RBP12.71□□□□□ -0.37
SRSF1-205ENST00000582730 CSNK1G3Q9Y6M4 447 aa12.71□□□□□ -0.37
SRSF1-205ENST00000582730 SPTY2D1-AS1A0A0U1RR47 76 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 GXYLT2A0PJZ3 443 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 OR5K3A6NET4 321 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 FAM25AB3EWG3 89 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 FAM25CB3EWG5 89 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 FAM25GB3EWG6 89 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 LRRTM2O43300 516 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 YES1P07947 543 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 GPLD1P80108 840 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 KLHL22Q53GT1 634 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 LHFPL3Q86UP9 236 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 ZNF619Q8N2I2 560 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 CDRT4Q8N9R6 151 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 OR4Q3Q8NH05 313 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 KLHDC7BQ96G42 594 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 SAMD8Q96LT4 415 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 DPH1Q9BZG8 443 aa12.71□□□□□ -0.38
SRSF1-205ENST00000582730 USP36Q9P275 1121 aaKnown RBP12.71□□□□□ -0.38
SRSF1-205ENST00000582730 A0A0A6YYC8 382 aaPredicted RBP12.7□□□□□ -0.38
SRSF1-205ENST00000582730 FAM183AA6NL82 134 aa12.7□□□□□ -0.38
SRSF1-205ENST00000582730 I3L1I5 382 aaPredicted RBP12.7□□□□□ -0.38
SRSF1-205ENST00000582730 OR5F1O95221 314 aa12.7□□□□□ -0.38
SRSF1-205ENST00000582730 SLC2A10O95528 541 aa12.7□□□□□ -0.38
SRSF1-205ENST00000582730 SOX18P35713 384 aa12.7□□□□□ -0.38
SRSF1-205ENST00000582730 GCGRP47871 477 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms