RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 EGLN3Q9H6Z9 239 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 TBC1D23Q9NUY8 699 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 KCNE5Q9UJ90 142 aa20.98■□□□□ 0.95
CCDC47-204ENST00000582252 NPIPA5A0A0B4J1W7 369 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 NPIPA7E9PJI5 369 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 DYRK3O43781 588 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 PRKYO43930 277 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 NPIPA8P0DM63 369 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 DBTP11182 482 aaKnown RBP20.97■□□□□ 0.95
CCDC47-204ENST00000582252 DRD5P21918 477 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 SSTR4P31391 388 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 CLK1P49759 484 aaKnown RBP20.97■□□□□ 0.95
CCDC47-204ENST00000582252 LSM11P83369 360 aaKnown RBP eCLIP20.97■□□□□ 0.95
CCDC47-204ENST00000582252 ZNF91Q05481 1191 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.97■□□□□ 0.95
CCDC47-204ENST00000582252 DGUOKQ16854 277 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 PLA2G2CQ5R387 149 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 ACSM5Q6NUN0 579 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 ZNF613Q6PF04 617 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 LINC00299Q6ZSB3 139 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 MED25Q71SY5 747 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 PRSS42Q7Z5A4 293 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 GPR135Q8IZ08 494 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 METTL27Q8N6F8 245 aaPredicted RBP20.97■□□□□ 0.95
CCDC47-204ENST00000582252 OR7G1Q8NGA0 311 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 WDR36Q8NI36 951 aaKnown RBP20.97■□□□□ 0.95
CCDC47-204ENST00000582252 TMEM163Q8TC26 289 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 TMEM255BQ8WV15 326 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 PRRX2Q99811 253 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 SEMA5BQ9P283 1151 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 ERVK-19Q9WJR5 959 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 ERGIC3Q9Y282 383 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 TMEM5Q9Y2B1 443 aa20.97■□□□□ 0.95
CCDC47-204ENST00000582252 M0R082 166 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 PTHP01270 115 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 THY1P04216 161 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 MAOAP21397 527 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 RFX3P48380 749 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 AMZ1Q400G9 498 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 YOD1Q5VVQ6 348 aaPredicted RBP20.96■□□□□ 0.95
CCDC47-204ENST00000582252 SLC46A3Q7Z3Q1 461 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 CDK20Q8IZL9 346 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 D2HGDHQ8N465 521 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 FAM181AQ8N9Y4 354 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 OR10A5Q9H207 317 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 MED17Q9NVC6 651 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 IL20Q9NYY1 176 aa20.96■□□□□ 0.95
CCDC47-204ENST00000582252 EFCAB9A8MZ26 197 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 KLF4O43474 513 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 AIREO43918 545 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 RPLP0P05388 317 aaKnown RBP20.95■□□□□ 0.94
CCDC47-204ENST00000582252 MSL3P1P0C860 447 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 GKN3PP0CG01 181 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 LIPAP38571 399 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 SEPHS1P49903 392 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 PGDP52209 483 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 RHAGQ02094 409 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 OCA2Q04671 838 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 KLHL22Q53GT1 634 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 ARMCX4Q5H9R4 360 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 PDZK1Q5T2W1 519 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 WDR74Q6RFH5 385 aaPredicted RBP20.95■□□□□ 0.94
CCDC47-204ENST00000582252 TTLL10Q6ZVT0 673 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 ZNF550Q7Z398 422 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 CMIPQ8IY22 773 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 OR2I1PQ8NGU4 316 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 LGALS12Q96DT0 336 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 LRR1Q96L50 414 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 HS6ST2Q96MM7 605 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 NDC1Q9BTX1 674 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 PLA2G12AQ9BZM1 189 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 DSN1Q9H410 356 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 CLDN16Q9Y5I7 305 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 CDH10Q9Y6N8 788 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 ZNF883P0CG24 379 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 HTR2AP28223 471 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 GPR4P46093 362 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 EFNB1P98172 346 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 KCNAB1Q14722 419 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 NR0B2Q15466 257 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 ZNF141Q15928 474 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 TIMM50Q3ZCQ8 353 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 SYT14P1Q58G82 188 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 RPL13AP3Q6NVV1 102 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 ZNF620Q6ZNG0 422 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 ZNF614Q8N883 585 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 TMEM239Q8WW34 195 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 BORCS5Q969J3 196 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 PLEKHA8Q96JA3 519 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 PRSS27Q9BQR3 290 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 YIPF2Q9BWQ6 316 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 MND1Q9BWT6 205 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 TRIM2Q9C040 744 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 SMOC1Q9H4F8 434 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 SERTAD3Q9UJW9 196 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 OR10H1Q9Y4A9 318 aa20.95■□□□□ 0.94
CCDC47-204ENST00000582252 PRODHO43272 600 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 SIGLEC6O43699 453 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 HMGN1P05114 100 aa20.94■□□□□ 0.94
CCDC47-204ENST00000582252 PRG2P13727 222 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms