RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 NADKO95544 446 aaPredicted RBP12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 FBXO45P0C2W1 286 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 CD46P15529 392 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 NAGAP17050 411 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 SOX3P41225 446 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 MAGEA2P43356 314 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 TNFSF10P50591 281 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 RPP38P78345 283 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 HPCAP84074 193 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 PLCXD2Q0VAA5 305 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 OR1C1Q15619 314 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 IFI44LQ53G44 452 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 ATAD3BQ5T9A4 648 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 PRAMEF8Q5VWM4 474 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 PRAMEF7Q5VXH5 474 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 KRT80Q6KB66 452 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 HMBOX1Q6NT76 420 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 MFSD12Q6NUT3 480 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 C16orf47Q6ZP98 133 aaPredicted RBP12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 RTL4Q6ZR62 310 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 Q6ZS92 163 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 C6orf120Q7Z4R8 191 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 ARMC8Q8IUR7 673 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 SLC34A3Q8N130 599 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 Q8NA96 180 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 SIMC1Q8NDZ2 872 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 OR5AK3PQ8NH89 298 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 OR5K1Q8NHB7 308 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 GEMIN6Q8WXD5 167 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 PNPLA2Q96AD5 504 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 SPACA9Q96E40 222 aaPredicted RBP12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 HSH2DQ96JZ2 352 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 SGCZQ96LD1 299 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 RBM4BQ9BQ04 359 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 LMF2Q9BU23 707 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 DOHHQ9BU89 302 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 RBM4Q9BWF3 364 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 COQ10BQ9H8M1 238 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 TIMMDC1Q9NPL8 285 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 PLA2G3Q9NZ20 509 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 MRTO4Q9UKD2 239 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 OAZ3Q9UMX2 235 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 DTX4Q9Y2E6 619 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 ABCA12Q86UK0 2595 aa12.4□□□□□ -0.42
CSNK1D-220ENST00000581737 EXPH5Q8NEV8 1989 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 WIPF3A6NGB9 483 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 G3V2T6 193 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 TP53I11O14683 189 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 ADAMDEC1O15204 470 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 ASNA1O43681 348 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 ABCB7O75027 752 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 OR6B1O95007 311 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 PRSS23O95084 383 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 HMGN2P05204 90 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 ALOX5P09917 674 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 ETFAP13804 333 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 ZNF26P17031 533 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 ABCD3P28288 659 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 CD96P40200 585 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 ALDH3A2P51648 485 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 CRISP3P54108 245 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 PSMD4P55036 377 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 LASP1Q14847 261 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 ZNF169Q14929 603 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 INPP5JQ15735 1006 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 NNATQ16517 81 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 CYP27C1Q4G0S4 372 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 CYBRD1Q53TN4 286 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 SLC6A19Q695T7 634 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 ENPP6Q6UWR7 440 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 PIWIL3Q7Z3Z3 882 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 SLC44A2Q8IWA5 706 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 CLEC4FQ8N1N0 589 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 MARVELD2Q8N4S9 558 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 CBR4Q8N4T8 237 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 RBMXL3Q8N7X1 1067 aaKnown RBP12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 TMEM178AQ8NBL3 297 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 MDS2Q8NDY4 140 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 NFKBIDQ8NI38 313 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 BBS10Q8TAM1 723 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 HOXB13Q92826 284 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 NRBF2Q96F24 287 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 ACTRT3Q9BYD9 372 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 REEP1Q9H902 201 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 IL1RAPQ9NPH3 570 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 EXD2Q9NVH0 621 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 GIN1Q9NXP7 522 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 ANKRD10Q9NXR5 420 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 SMPD3Q9NY59 655 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 LIPT1Q9Y234 373 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 PCDHGB6Q9Y5F9 930 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 PCDHGB3Q9Y5G1 929 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 NPFFR2Q9Y5X5 522 aa12.39□□□□□ -0.43
CSNK1D-220ENST00000581737 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 PPM1BO75688 479 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 SLC25A12O75746 678 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 NKX2-2O95096 273 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 F10P00742 488 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 CT45A8P0DMV1 189 aa12.38□□□□□ -0.43
CSNK1D-220ENST00000581737 CT45A9P0DMV2 189 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms