RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, human

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMP22-208	ENST00000580584	TNFSF13	O75888	250 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	KRT16	P08779	473 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	ALDOC	P09972	364 aa	Known RBP	13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	FREM3	P0C091	2139 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	KIT	P10721	976 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	PHC1	P78364	1004 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	PLPPR5	Q32ZL2	321 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	NDUFAF6	Q330K2	333 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	GLYR1	Q49A26	553 aa	Predicted RBP	13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	FLYWCH1	Q4VC44	716 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	SPANXN4	Q5MJ08	99 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	GGN	Q86UU5	652 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	OR8J2	Q8NGG1	315 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	NRGN	Q92686	78 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	TLCD1	Q96CP7	247 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	SLC35G5	Q96KT7	338 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	TEX37	Q96LM6	180 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	RNF145	Q96MT1	663 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	AP4B1	Q9Y6B7	739 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584	ARHGAP21	Q5T5U3	1957 aa		13.98	□□□□□ -0.17
PMP22-208	ENST00000580584		A0A087WZY1	265 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	GOLGA8Q	A0A0J9YX86	632 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584		A0A1W2PQD3	144 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	GOLGA8O	A6NCC3	632 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	GOLGA8N	F8WBI6	632 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	LINC01387	J3KSC0	135 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	SNN	O75324	88 aa	Predicted RBP	13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	OPN1LW	P04000	364 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	ZNF17	P17021	662 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	CAPN3	P20807	821 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	EPHA3	P29320	983 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	CPA2	P48052	419 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	ZNF41	P51814	821 aa	Predicted RBP	13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	ZNF117	Q03924	483 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	PON3	Q15166	354 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	KLHL26	Q53HC5	615 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	OGFOD2	Q6N063	350 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	BHLHB9	Q6PI77	547 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	OLIG3	Q7RTU3	272 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	C6orf120	Q7Z4R8	191 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	MISP	Q8IVT2	679 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	ZNF614	Q8N883	585 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	CNEP1R1	Q8N9A8	125 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	ZNF527	Q8NB42	609 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	B4GALNT2	Q8NHY0	566 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	FNDC9	Q8TBE3	224 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	PHOSPHO1	Q8TCT1	267 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	TESC	Q96BS2	214 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	GPATCH1	Q9BRR8	931 aa	Known RBP	13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	RBM24	Q9BX46	236 aa	Known RBP	13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	ACBD3	Q9H3P7	528 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	TMEM185B	Q9H7F4	350 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	AIG1	Q9NVV5	245 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	THAP1	Q9NVV9	213 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	GALNT8	Q9NY28	637 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	NKIRAS1	Q9NYS0	192 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.97	□□□□□ -0.17
PMP22-208	ENST00000580584	CARD8	Q9Y2G2	431 aa		13.97	□□□□□ -0.17
PMP22-208	ENST00000580584		E9PBE3	544 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	EIF1AY	O14602	144 aa	Known RBP	13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	HDAC3	O15379	428 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	SCN2B	O60939	215 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	TNFRSF21	O75509	655 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	CPSF4	O95639	269 aa	Known RBP	13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	MATN1	P21941	496 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	CPOX	P36551	454 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	EEFSEC	P57772	596 aa	Known RBP	13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	UFM1	P61960	85 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	SIRPA	P78324	504 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	FOXF1	Q12946	379 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	CASP8	Q14790	479 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	FAM174B	Q3ZCQ3	159 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	PPP4R4	Q6NUP7	873 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	VWA1	Q6PCB0	445 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	CBLN3	Q6UW01	205 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	WDR75	Q8IWA0	830 aa	Known RBP	13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	LRRC34	Q8IZ02	419 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	METTL25	Q8N6Q8	603 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	LINC01560	Q8TB33	94 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	POC1B	Q8TC44	478 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	ACTRT2	Q8TDY3	377 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	ZBTB8A	Q96BR9	441 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	PACSIN3	Q9UKS6	424 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	PCDHGB4	Q9UN71	923 aa		13.96	□□□□□ -0.17
PMP22-208	ENST00000580584	CENPVL1	A0A0U1RR11	272 aa		13.95	□□□□□ -0.18
PMP22-208	ENST00000580584	PRSS51	A0A1B0GVH4	220 aa		13.95	□□□□□ -0.18
PMP22-208	ENST00000580584	C7orf72	A4D263	438 aa		13.95	□□□□□ -0.18
PMP22-208	ENST00000580584	TUBAL3	A6NHL2	446 aa		13.95	□□□□□ -0.18
PMP22-208	ENST00000580584	NPIPB9	F8W1W9	429 aa		13.95	□□□□□ -0.18
PMP22-208	ENST00000580584	CTAG2	O75638	210 aa		13.95	□□□□□ -0.18
PMP22-208	ENST00000580584	NUDT14	O95848	222 aa		13.95	□□□□□ -0.18
PMP22-208	ENST00000580584	C1QC	P02747	245 aa		13.95	□□□□□ -0.18
PMP22-208	ENST00000580584	IL11	P20809	199 aa		13.95	□□□□□ -0.18
PMP22-208	ENST00000580584	PSMA4	P25789	261 aa	Known RBP	13.95	□□□□□ -0.18
PMP22-208	ENST00000580584	IL12A	P29459	219 aa		13.95	□□□□□ -0.18
PMP22-208	ENST00000580584	PEX19	P40855	299 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms