RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PDCD4Q53EL6 469 aaKnown RBP5.94□□□□□ -1.46
TRAF4-213ENST00000578917 NHSL2Q5HYW2 709 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 PDSS1Q5T2R2 415 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 RIPPLY2Q5TAB7 128 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 NSUN5P2Q63ZY6 315 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 ARSKQ6UWY0 536 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 APOOLQ6UXV4 268 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 MEX3BQ6ZN04 569 aaKnown RBP5.94□□□□□ -1.46
TRAF4-213ENST00000578917 EIF3MQ7L2H7 374 aaKnown RBP5.94□□□□□ -1.46
TRAF4-213ENST00000578917 MTERF4Q7Z6M4 381 aaKnown RBP5.94□□□□□ -1.46
TRAF4-213ENST00000578917 ZAR1Q86SH2 424 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 RNF130Q86XS8 419 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 GRAMD2AQ8IUY3 354 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 ATP6V1C2Q8NEY4 427 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 TNIP2Q8NFZ5 429 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 B4GALNT2Q8NHY0 566 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 PNPT1Q8TCS8 783 aaKnown RBP5.94□□□□□ -1.46
TRAF4-213ENST00000578917 ZPLD1Q8TCW7 415 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 VPS33AQ96AX1 596 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 INTS12Q96CB8 462 aaKnown RBP5.94□□□□□ -1.46
TRAF4-213ENST00000578917 C1GALT1C1Q96EU7 318 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 THOC1Q96FV9 657 aaKnown RBP5.94□□□□□ -1.46
TRAF4-213ENST00000578917 REXO5Q96IC2 774 aaKnown RBP5.94□□□□□ -1.46
TRAF4-213ENST00000578917 ITCHQ96J02 903 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 MAGEB18Q96M61 343 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 CCDC115Q96NT0 180 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 SDF2Q99470 211 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 TUBA1CQ9BQE3 449 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 RTN4RQ9BZR6 473 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 PRDM14Q9GZV8 571 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 CACYBPQ9HB71 228 aaKnown RBP5.94□□□□□ -1.46
TRAF4-213ENST00000578917 Q9UFV3 132 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 BTNL2Q9UIR0 455 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 DCTN4Q9UJW0 460 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 MKLN1Q9UL63 735 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 TRIM33Q9UPN9 1127 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 CARD8Q9Y2G2 431 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF337Q9Y3M9 751 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 DTNAQ9Y4J8 743 aa5.94□□□□□ -1.46
TRAF4-213ENST00000578917 MAP1AP78559 2803 aaPredicted RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 CROCCQ5TZA2 2017 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF407Q9C0G0 2248 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 NPIPA5A0A0B4J1W7 369 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 A0A0G2JND7 137 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 A0A1W2PQD3 144 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 FAM234BA2RU67 622 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 SERINC4A6NH21 518 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 CD8B2A6NJW9 211 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 SLC22A20A6NK97 555 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 CLCA1A8K7I4 914 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 SHISA8B8ZZ34 492 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 EEF1E1-BLOC1S5C9J1V9 151 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 NPIPA7E9PJI5 369 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 EIF1AYO14602 144 aaKnown RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 ZNF264O43296 627 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 EEF1E1O43324 174 aaKnown RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 FCMRO60667 390 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 SYNGR4O95473 234 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 PLGP00747 810 aaPredicted RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 VIMP08670 466 aaKnown RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 NPIPA8P0DM63 369 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 TMIGD3P0DMS9 266 aaPredicted RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 UBL4AP11441 157 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 CTSSP25774 331 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 TIMP3P35625 211 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 EIF1P41567 113 aaKnown RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 EIF1AXP47813 144 aaKnown RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 CPA2P48052 419 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 LHX2P50458 406 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 GFRA1P56159 465 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 CLDN15P56746 228 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 MYBPHQ13203 477 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 GNA13Q14344 377 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 CDSNQ15517 529 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 SLC25A35Q3KQZ1 300 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 ARHGAP11BQ3KRB8 267 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 TIGD2Q4W5G0 525 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 KLHL26Q53HC5 615 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 DCST1Q5T197 706 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 PDZK1Q5T2W1 519 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 OR2A2Q6IF42 318 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 DNAJC14Q6Y2X3 702 aaPredicted RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 MAVSQ7Z434 540 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 MCEMP1Q8IX19 187 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 LILRA2Q8N149 483 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 ARFGAP2Q8N6H7 521 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 CNEP1R1Q8N9A8 125 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 FADS6Q8N9I5 356 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 TOR1AIP2Q8NFQ8 470 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 CKAP2Q8WWK9 683 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 HOXB13Q92826 284 aaPredicted RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 WNT2BQ93097 391 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 ZBTB8AQ96BR9 441 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 ROPN1LQ96C74 230 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 NTNG2Q96CW9 530 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 NEURL3Q96EH8 262 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 MAELQ96JY0 434 aaKnown RBP5.93□□□□□ -1.46
TRAF4-213ENST00000578917 INPP5KQ9BT40 448 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 CCDC28BQ9BUN5 200 aa5.93□□□□□ -1.46
TRAF4-213ENST00000578917 PINK1Q9BXM7 581 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms