RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 C9orf16Q9BUW7 83 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 OSBPL10Q9BXB5 764 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 NKX1-2Q9UD57 310 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 ZNF223Q9UK11 482 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 ABCG2Q9UNQ0 655 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 ENPP4Q9Y6X5 453 aa12.81□□□□□ -0.36
CSNK1D-209ENST00000578904 PKD1L2Q7Z442 2459 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 A0A1W2PQD3 144 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 hCG_2039718K7EN88 272 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 GTPBP1O00178 669 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 WWP2O00308 870 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 CASQ2O14958 399 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 ITGB2P05107 769 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 VHLP40337 213 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 EEF1A1P68104 462 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 RAPSNQ13702 412 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 FGFBP1Q14512 234 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 NRF1Q16656 503 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 MEP1AQ16819 746 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 PDZK1Q5T2W1 519 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 MRPL2Q5T653 305 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 TCTN3Q6NUS6 607 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 ZNF836Q6ZNA1 936 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 HIPK1Q86Z02 1210 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 ZDHHC13Q8IUH4 622 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 SIRT6Q8N6T7 355 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 ICA1LQ8NDH6 482 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 PIK3C3Q8NEB9 887 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 GPR32P1Q8NGA4 272 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 OR10Q1Q8NGQ4 319 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 THAP3Q8WTV1 239 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 ASB15Q8WXK1 588 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 EXTL1Q92935 676 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 NRBF2Q96F24 287 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 C7orf34Q96L11 122 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 PIP5K1AQ99755 562 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 ARHGDIGQ99819 225 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 TBL1XR1Q9BZK7 514 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 QRSL1Q9H0R6 528 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 SDHAF3Q9NRP4 125 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 FBXO34Q9NWN3 711 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 GPR83Q9NYM4 423 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 RIMS3Q9UJD0 308 aa12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 FASNP49327 2511 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-209ENST00000578904 CDHR4A6H8M9 788 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 SERINC4A6NH21 518 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 NPIPB9F8W1W9 429 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 FMO6PO60774 539 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 ZIC2O95409 532 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 CSTAP01040 98 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 IGKV1D-16P01601 117 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 CYP4B1P13584 511 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 ZNF23P17027 643 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 DNAJA1P31689 397 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 OR1E2P47887 323 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 PTDSS1P48651 473 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 SSR4P51571 173 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 SOX8P57073 446 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 VLDLRP98155 873 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 GRAMD1BQ3KR37 738 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 KLHL26Q53HC5 615 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 FCRLBQ6BAA4 426 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 DEF8Q6ZN54 512 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 AMIGO2Q86SJ2 522 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 GPALPP1Q8IXQ4 340 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 PRR22Q8IZ63 422 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 ARMC10Q8N2F6 343 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 TMEM156Q8N614 296 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 FDCSPQ8NFU4 85 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 OR5K1Q8NHB7 308 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 VANGL1Q8TAA9 524 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 ZG16BQ96DA0 208 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 EPYCQ99645 322 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 ARHGAP9Q9BRR9 750 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 FNDC11Q9BVV2 318 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 AMBRA1Q9C0C7 1298 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 KLHL4Q9C0H6 718 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 SEMA6AQ9H2E6 1030 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 ZBTB20Q9HC78 741 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 SELENONQ9NZV5 590 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 NDUFAF4Q9P032 175 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 TESQ9UGI8 421 aaKnown RBP12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 ZZEF1O43149 2961 aa12.79□□□□□ -0.36
CSNK1D-209ENST00000578904 NPIPA5A0A0B4J1W7 369 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 ALG1L2C9J202 215 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 NPIPA7E9PJI5 369 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 G3V2T6 193 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 NDUFB5O43674 189 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 PEX1O43933 1283 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 PRKNO60260 465 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 EIF4E2O60573 245 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 ITGA10O75578 1167 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 CEACAM4O75871 244 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 OR2J2O76002 312 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 OXSR1O95747 527 aaPredicted RBP12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 MT-ND1P03886 318 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 FBXO45P0C2W1 286 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 NPIPA8P0DM63 369 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 CASRP41180 1078 aa12.78□□□□□ -0.36
CSNK1D-209ENST00000578904 SLC6A8P48029 635 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms