RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 OR6C70A6NIJ9 312 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SLCO1B7G3V0H7 640 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SAP18O00422 153 aaKnown RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 KLF11O14901 512 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TO15178 435 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TMPRSS2O15393 492 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CLOCKO15516 846 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ZIC3O60481 467 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SS18L1O75177 396 aaPredicted RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 UGT2B11O75310 529 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SKAP2O75563 359 aaPredicted RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CRCPO75575 148 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CD8AP01732 235 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 JUNP05412 331 aaKnown RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 FGF4P08620 206 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 UROSP10746 265 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 USF1P22415 310 aaPredicted RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 DPP4P27487 766 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ADH6P28332 368 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PIK3CBP42338 1070 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GYS2P54840 703 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HNRNPH2P55795 449 aaKnown RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 DSCR4P56555 118 aaPredicted RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CLDN15P56746 228 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 RPS3AP61247 264 aaKnown RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PSPHP78330 225 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HMGCS1Q01581 520 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GUCY1A3Q02108 690 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PLCXD2Q0VAA5 305 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GALNT1Q10472 559 aaPredicted RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 IFT88Q13099 833 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SLAMF1Q13291 335 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GANABQ14697 944 aaKnown RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PON3Q15166 354 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 UGT3A2Q3SY77 523 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 DEPDC1Q5TB30 811 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 C6orf163Q5TEZ5 329 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ATG16L1Q676U5 607 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 OR4C11Q6IEV9 310 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 OR52E8Q6IFG1 317 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 MRM1Q6IN84 353 aaKnown RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TREML4Q6UXN2 200 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SSX8Q7RTT4 187 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 STK32CQ86UX6 486 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 UBQLNLQ8IYU4 475 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 C3orf56Q8N813 242 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TWIST2Q8WVJ9 160 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TMCO6Q96DC7 493 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 OMA1Q96E52 524 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 CMTM7Q96FZ5 175 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SLC35A4Q96G79 324 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GMPPAQ96IJ6 420 aaPredicted RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 MAGEB18Q96M61 343 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SORBS1Q9BX66 1292 aaKnown RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 PINK1Q9BXM7 581 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HDHD5Q9BXW7 423 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ACPTQ9BZG2 426 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 OR51B5Q9H339 312 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 ELOVL6Q9H5J4 265 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 WDR41Q9HAD4 459 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 GLRX2Q9NS18 164 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 THAP1Q9NVV9 213 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 MARCOQ9UEW3 520 aaPredicted RBP6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 HAO1Q9UJM8 370 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 FBXL2Q9UKC9 423 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 SNX6Q9UNH7 406 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 RAP2CQ9Y3L5 183 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TSC22D4Q9Y3Q8 395 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 TRAF6Q9Y4K3 522 aa6.4□□□□□ -1.38
CDK5RAP3-209ENST00000578663 H7C417 338 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 FOXE1O00358 373 aaPredicted RBP6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PLPP1O14494 284 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PIP5K1BO14986 540 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 POLR3GO15318 223 aaPredicted RBP6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ULK1O75385 1050 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 VENTXO95231 258 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 KRT6AP02538 564 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 KRT6BP04259 564 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 KITP10721 976 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 ITGA2P17301 1181 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 MDH1P40925 334 aaKnown RBP6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 KRT6CP48668 564 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 CTBP2P56545 445 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 PHEXP78562 749 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 LSM11P83369 360 aaKnown RBP eCLIP6.39□□□□□ -1.393e-9■■□□□ 11.8
CDK5RAP3-209ENST00000578663 BTKQ06187 659 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 AGAP6Q5VW22 663 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 C18orf63Q68DL7 685 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 C11orf71Q6IPW1 123 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 SEZ6L2Q6UXD5 910 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 MAVSQ7Z434 540 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 FADS6Q8N9I5 356 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 KBTBD8Q8NFY9 601 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 OR2T11Q8NH01 316 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 C10orf105Q8TEF2 133 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 DOK4Q8TEW6 326 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 HSD17B8Q92506 261 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 FAM168AQ92567 244 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 RGMAQ96B86 450 aa6.39□□□□□ -1.39
CDK5RAP3-209ENST00000578663 APIPQ96GX9 242 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms