RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 TTYH2Q9BSA4 534 aa7.8□□□□□ -1.16
PPP4R1-210ENST00000578557 TACO1Q9BSH4 297 aaKnown RBP7.8□□□□□ -1.16
PPP4R1-210ENST00000578557 SPATA5L1Q9BVQ7 753 aa7.8□□□□□ -1.16
PPP4R1-210ENST00000578557 GP6Q9HCN6 339 aa7.8□□□□□ -1.16
PPP4R1-210ENST00000578557 KCNJ16Q9NPI9 418 aa7.8□□□□□ -1.16
PPP4R1-210ENST00000578557 EQTNQ9NQ60 294 aa7.8□□□□□ -1.16
PPP4R1-210ENST00000578557 EXOSC3Q9NQT5 275 aaKnown RBP7.8□□□□□ -1.16
PPP4R1-210ENST00000578557 SERINC1Q9NRX5 453 aa7.8□□□□□ -1.16
PPP4R1-210ENST00000578557 MARCOQ9UEW3 520 aaPredicted RBP7.8□□□□□ -1.16
PPP4R1-210ENST00000578557 IFT52Q9Y366 437 aa7.8□□□□□ -1.16
PPP4R1-210ENST00000578557 FER1L5A0AVI2 2057 aa7.8□□□□□ -1.16
PPP4R1-210ENST00000578557 UBR5O95071 2799 aaPredicted RBP7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 A0A0G2JPF8 293 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 A0A1W2PP18 115 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 HNRNPCL2B2RXH8 293 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 HNRNPCL3B7ZW38 293 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 ETV2O00321 342 aaPredicted RBP7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 NDUFAB1O14561 156 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 DVL2O14641 736 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 ZIC3O60481 467 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 HNRNPCL1O60812 293 aaKnown RBP7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 HNRNPCL4P0DMR1 293 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 ACP2P11117 423 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 FCGR2AP12318 317 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 PGCP20142 388 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 SOAT1P35610 550 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 CRISP3P54108 245 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 SRSF1Q07955 248 aaKnown RBP eCLIP7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 STX5Q13190 355 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 CBFBQ13951 182 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 NNATQ16517 81 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 C1orf185Q5T7R7 199 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 ZNF585AQ6P3V2 769 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 ADGRE4PQ86SQ3 457 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 PEX5LQ8IYB4 626 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 GTPBP8Q8N3Z3 284 aaPredicted RBP7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 SIMC1Q8NDZ2 872 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 OR2M3Q8NG83 312 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 OR5W2Q8NH69 310 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 B4GALNT2Q8NHY0 566 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 DOK4Q8TEW6 326 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 XAGE5Q8WWM1 108 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 ITLN2Q8WWU7 325 aaPredicted RBP7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 ST8SIA1Q92185 356 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 C16orf58Q96GQ5 468 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 MRGPRX4Q96LA9 322 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 PPP1R36Q96LQ0 422 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 SFXN2Q96NB2 322 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 SPOCK3Q9BQ16 436 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 ZNF350Q9GZX5 532 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 LAT2Q9GZY6 243 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 PIGMQ9H3S5 423 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 DSN1Q9H410 356 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 P2RX2Q9UBL9 471 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 PLEKHB1Q9UF11 243 aaPredicted RBP7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 LEF1Q9UJU2 399 aaPredicted RBP7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 EDARQ9UNE0 448 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 ZNF175Q9Y473 711 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 WDR45Q9Y484 360 aa7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 SPIN1Q9Y657 262 aaPredicted RBP7.79□□□□□ -1.16
PPP4R1-210ENST00000578557 A0A096LPI6 279 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 MBD3L4A6NDZ8 208 aaPredicted RBP7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 MBD3L3A6NE82 208 aaPredicted RBP7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 PRORSD1PA6NEY8 169 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 SERINC4A6NH21 518 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 MBD3L5A6NJ08 208 aaPredicted RBP7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 BBIP1A8MTZ0 92 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 NPIPB9F8W1W9 429 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 G3V3Y1 287 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 FAAHO00519 579 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 ADAM10O14672 748 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 ZNF264O43296 627 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 HNRNPRO43390 633 aaKnown RBP7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 CCDC22O60826 627 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 DNAJA2O60884 412 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 SASH3O75995 380 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 RCBTB2O95199 551 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 CPSF4O95639 269 aaKnown RBP7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 DBIP07108 87 aaKnown RBP7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 HK1P19367 917 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 CTSSP25774 331 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 CEACAM8P31997 349 aaPredicted RBP7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 DCTP40126 519 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 RFC3P40938 356 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 APOBEC1P41238 236 aaKnown RBP7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 DLX5P56178 289 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 RBBP4Q09028 425 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 PMPCAQ10713 525 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 GRAMD1BQ3KR37 738 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 SLC25A53Q5H9E4 307 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 LRIF1Q5T3J3 769 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 C1QTNF12Q5T7M4 302 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 SP5Q6BEB4 398 aaPredicted RBP7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 ESPNLQ6ZVH7 1005 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 SSX8Q7RTT4 187 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 FGD2Q7Z6J4 655 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 MARCH3Q86UD3 253 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 KIF18BQ86Y91 864 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 GRAMD2AQ8IUY3 354 aa7.78□□□□□ -1.16
PPP4R1-210ENST00000578557 DPP10Q8N608 796 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms