RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 ZNF836Q6ZNA1 936 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 CCDC80Q76M96 950 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 TMEM178AQ8NBL3 297 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 SH3YL1Q96HL8 342 aaPredicted RBP11.1□□□□□ -0.63
IFT20-207ENST00000578547 TPD52L3Q96J77 140 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 ZNF597Q96LX8 424 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 UBL7Q96S82 380 aaPredicted RBP11.1□□□□□ -0.63
IFT20-207ENST00000578547 FAM173AQ9BQD7 235 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 ANGPTL4Q9BY76 406 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 SLC25A18Q9H1K4 315 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 DEPPQ9NTK1 212 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 PPP4R1LQ9P1A2 415 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 ZNF232Q9UNY5 417 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 HRH3Q9Y5N1 445 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 WIF1Q9Y5W5 379 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 V9GYQ6 96 aa11.1□□□□□ -0.63
IFT20-207ENST00000578547 A0A1W2PQD3 144 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 PINLYPA6NC86 204 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 ATXN7O15265 892 aaPredicted RBP11.09□□□□□ -0.63
IFT20-207ENST00000578547 OIP5O43482 229 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 HCRTR2O43614 444 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 PEX1O43933 1283 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 TPST1O60507 370 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 BCAS1O75363 584 aaPredicted RBP11.09□□□□□ -0.63
IFT20-207ENST00000578547 MFN2O95140 757 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 CSTAP01040 98 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 IFNA14P01570 189 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 THBS1P07996 1170 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 UBTFL6P0CB48 400 aaPredicted RBP11.09□□□□□ -0.63
IFT20-207ENST00000578547 UBL4AP11441 157 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 SFTPCP11686 197 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 NID1P14543 1247 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 ATP6V1B2P21281 511 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 CNR1P21554 472 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 MEOX1P50221 254 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 CCR4P51679 360 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 CRYBA2P53672 197 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 KCNJ10P78508 379 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 DMTNQ08495 405 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 SNTA1Q13424 505 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 TRIM25Q14258 630 aaKnown RBP11.09□□□□□ -0.63
IFT20-207ENST00000578547 FGFBP1Q14512 234 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 INPP5JQ15735 1006 aaPredicted RBP11.09□□□□□ -0.63
IFT20-207ENST00000578547 PLEKHN1Q494U1 663 aaPredicted RBP11.09□□□□□ -0.63
IFT20-207ENST00000578547 NADK2Q4G0N4 442 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 GLIPR1L2Q4G1C9 344 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 CYBRD1Q53TN4 286 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 COLEC12Q5KU26 742 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 TBCELQ5QJ74 424 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 MRPL2Q5T653 305 aaKnown RBP11.09□□□□□ -0.63
IFT20-207ENST00000578547 SLC6A19Q695T7 634 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 SLC30A6Q6NXT4 461 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 PGM2L1Q6PCE3 622 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 EIF3MQ7L2H7 374 aaKnown RBP11.09□□□□□ -0.63
IFT20-207ENST00000578547 PACS2Q86VP3 889 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 DHFR2Q86XF0 187 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 PTRH1Q86Y79 214 aaKnown RBP11.09□□□□□ -0.63
IFT20-207ENST00000578547 SPPL2CQ8IUH8 684 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 SULF2Q8IWU5 870 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 OR2M7Q8NG81 312 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 OR10Q1Q8NGQ4 319 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 RNF138Q8WVD3 245 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 PMM1Q92871 262 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 ASB9Q96DX5 294 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 ARSGQ96EG1 525 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 SCMH1Q96GD3 660 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 NSMCE2Q96MF7 247 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 PROK2Q9HC23 129 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 SDHAF3Q9NRP4 125 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.09□□□□□ -0.63
IFT20-207ENST00000578547 RLIMQ9NVW2 624 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 ADPRHL2Q9NX46 363 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 SLC7A8Q9UHI5 535 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 SLC13A4Q9UKG4 626 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 B3GNT3Q9Y2A9 372 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 CARD8Q9Y2G2 431 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 IFT52Q9Y366 437 aa11.09□□□□□ -0.63
IFT20-207ENST00000578547 ANKRD33BA6NCL7 494 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 ANKRD65E5RJM6 399 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 KLRC4-KLRK1H3BQV0 150 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 FRS3O43559 492 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 RRP9O43818 475 aaKnown RBP11.08□□□□□ -0.64
IFT20-207ENST00000578547 CIB2O75838 187 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 SNX4O95219 450 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 PRKAR1BP31321 381 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 ERFP50548 548 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 GAS1P54826 345 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 EEF1A1P68104 462 aaKnown RBP11.08□□□□□ -0.64
IFT20-207ENST00000578547 MS4A2Q01362 244 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 PMP22Q01453 160 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 PLGLB1Q02325 96 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 ZNF117Q03924 483 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 C17orf67Q0P5P2 114 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 FXNQ16595 210 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 EIPR1Q53HC9 387 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 RNF220Q5VTB9 566 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 FNDC7Q5VTL7 733 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 TMEM81Q6P7N7 255 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 DHRS4L2Q6PKH6 230 aa11.08□□□□□ -0.64
IFT20-207ENST00000578547 Q6ZS92 163 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms