RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 NPAP1Q9NZP6 1156 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 PRSS50Q9UI38 385 aa8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 MRTO4Q9UKD2 239 aaKnown RBP8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 C19orf53Q9UNZ5 99 aaPredicted RBP8.96□□□□□ -0.98
NPLOC4-220ENST00000576940 A0A087WV62 115 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 A0A087WZY1 265 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 MANBAO00462 879 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 SMIM24O75264 130 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 LY6HO94772 140 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 PRKD3O94806 890 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 OTCP00480 354 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 YES1P07947 543 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 RPS17P08708 135 aaKnown RBP8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 RBP1P09455 135 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 PYGBP11216 843 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 SLC25A16P16260 332 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 ENPP1P22413 925 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 EDNRAP25101 427 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 STX2P32856 288 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 PSMD4P55036 377 aaKnown RBP8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 PLTPP55058 493 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 LSM11P83369 360 aaKnown RBP eCLIP8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 SLC18A2Q05940 514 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 PPA1Q15181 289 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 ZNF239Q16600 458 aaKnown RBP8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 PLPPR5Q32ZL2 321 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 PDSS1Q5T2R2 415 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 C11orf71Q6IPW1 123 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 CCDC91Q7Z6B0 441 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 PIAS4Q8N2W9 510 aaPredicted RBP8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 RNF128Q8TEB7 428 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 ZNF483Q8TF39 744 aaPredicted RBP8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 FAM168AQ92567 244 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 ZBTB8AQ96BR9 441 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 ELP4Q96EB1 424 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 SH3YL1Q96HL8 342 aaPredicted RBP8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 REXO5Q96IC2 774 aaKnown RBP8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 KLHL15Q96M94 604 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 LMF2Q9BU23 707 aaKnown RBP8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 POTEKPQ9BYX7 375 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 ACPTQ9BZG2 426 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 GLIPR2Q9H4G4 154 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 CBLN4Q9NTU7 201 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 KLHL13Q9P2N7 655 aa8.95□□□□□ -0.98
NPLOC4-220ENST00000576940 IGHV3-15A0A0B4J1V0 119 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 ALG1L2C9J202 215 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 DLX3O60479 287 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 PSMG1O95456 288 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 SBK3P0C264 359 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 PABPC4LP0CB38 370 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 USF1P22415 310 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 HSD17B3P37058 310 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 PAFAH1B1P43034 410 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 MANFP55145 182 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 ETF1P62495 437 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 GUCY2DQ02846 1103 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 NAB1Q13506 487 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 RNPS1Q15287 305 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 ZNHIT3Q15649 155 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 Q6ZSR9 355 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 FCRLAQ7L513 359 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 ZAR1Q86SH2 424 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 TRABD2AQ86V40 505 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 OR2L13Q8N349 312 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 MUC15Q8N387 334 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 ATP6V1C2Q8NEY4 427 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 CDC26Q8NHZ8 85 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 GPR151Q8TDV0 419 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 C10orf105Q8TEF2 133 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 PROX1Q92786 737 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 C1orf159Q96HA4 380 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 DHRS9Q9BPW9 319 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 PLA2G12AQ9BZM1 189 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 EQTNQ9NQ60 294 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 DDX18Q9NVP1 670 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 ING1Q9UK53 422 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 SAR1BQ9Y6B6 198 aa8.94□□□□□ -0.98
NPLOC4-220ENST00000576940 LOC100289279A0A1B0GTE1 492 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 A0A1W2PR80 420 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 C7orf72A4D263 438 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 RAD51CO43502 376 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 ULK1O75385 1050 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 KCNH1O95259 989 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 OXSR1O95747 527 aaPredicted RBP8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 KRT6AP02538 564 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 KRT6BP04259 564 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 ANXA4P09525 319 aaPredicted RBP8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 LINGO3P0C6S8 592 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 HSD3B1P14060 373 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 DDCP20711 480 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 IGHV1-2P23083 117 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 ME2P23368 584 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 HSD3B2P26439 372 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 TIA1P31483 386 aaKnown RBP eCLIP8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 KRT6CP48668 564 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 HTR6P50406 440 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 SERPINB8P50452 374 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 FABP6P51161 128 aa8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 ZNF41P51814 821 aaPredicted RBP8.93□□□□□ -0.98
NPLOC4-220ENST00000576940 CLCQ05315 142 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms