RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 APOBEC3AP31941 199 aaPredicted RBP5.19□□□□□ -1.58
SMG6-219ENST00000575663 CXCR5P32302 372 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 ZNF41P51814 821 aaPredicted RBP5.19□□□□□ -1.58
SMG6-219ENST00000575663 ARFIP2P53365 341 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 MAPK12P53778 367 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 CARD18P57730 90 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 CORO7P57737 925 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 TAS2R39P59534 338 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 PHC1P78364 1004 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 C17orf67Q0P5P2 114 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 MGAT2Q10469 447 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 FOXL1Q12952 345 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 MLC1Q15049 377 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 LTB4RQ15722 352 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 ZSCAN26Q16670 478 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 DECR1Q16698 335 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 KCTD19Q17RG1 926 aaPredicted RBP5.19□□□□□ -1.58
SMG6-219ENST00000575663 TMEM44Q2T9K0 475 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 TRMT12Q53H54 448 aaKnown RBP5.19□□□□□ -1.58
SMG6-219ENST00000575663 CT45A2Q5DJT8 189 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 SH2D4BQ5SQS7 431 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 CCNYL2Q5T2Q4 361 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 NPSR1Q6W5P4 371 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 B3GLCTQ6Y288 498 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 NUFIP2Q7Z417 695 aaKnown RBP5.19□□□□□ -1.58
SMG6-219ENST00000575663 ZC3HC1Q86WB0 502 aaKnown RBP5.19□□□□□ -1.58
SMG6-219ENST00000575663 SLC44A2Q8IWA5 706 aaPredicted RBP5.19□□□□□ -1.58
SMG6-219ENST00000575663 SLC43A2Q8N370 569 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 GTPBP8Q8N3Z3 284 aaPredicted RBP5.19□□□□□ -1.58
SMG6-219ENST00000575663 SPATA6LQ8N4H0 392 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 CDYL2Q8N8U2 506 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 ZNF675Q8TD23 568 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 DUSP19Q8WTR2 217 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 TSPAN17Q96FV3 270 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 KLHL15Q96M94 604 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 VSTM2LQ96N03 204 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 FOXN4Q96NZ1 517 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 SERPINI1Q99574 410 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 VRK1Q99986 396 aaPredicted RBP5.19□□□□□ -1.58
SMG6-219ENST00000575663 SOX7Q9BT81 388 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 FAIM2Q9BWQ8 316 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 SUCNR1Q9BXA5 334 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 TMEM185BQ9H7F4 350 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 FAM120CQ9NX05 1096 aaKnown RBP5.19□□□□□ -1.58
SMG6-219ENST00000575663 NSMCE4AQ9NXX6 385 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 TAS2R9Q9NYW1 312 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 AHSPQ9NZD4 102 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 NUDT4Q9NZJ9 180 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 KLHL9Q9P2J3 617 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 ADAM29Q9UKF5 820 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 GRIP1Q9Y3R0 1128 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 PCDHB14Q9Y5E9 798 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 PCDHA9Q9Y5H5 950 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 ATP23Q9Y6H3 246 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 HEATR5AQ86XA9 2040 aa5.19□□□□□ -1.58
SMG6-219ENST00000575663 FREM1Q5H8C1 2179 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 IGLV3-32A0A0A0MS00 114 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 CIB4A0PJX0 185 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 C7orf72A4D263 438 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 TRIM64CA6NLI5 447 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 GJE1A6NN92 205 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 B4DSR2 109 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 SUPT3HB4E1H0 165 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 ZNF814B7Z6K7 855 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 PHGDHO43175 533 aaKnown RBP5.18□□□□□ -1.58
SMG6-219ENST00000575663 FADS1O60427 444 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 UGDHO60701 494 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 SUPT3HO75486 399 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 RAD51DO75771 328 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 PRKD3O94806 890 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 NTN1O95631 604 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 ANGPTL1O95841 491 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 KLK1P06870 262 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 YES1P07947 543 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 TACSTD2P09758 323 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 LTA4HP09960 611 aaKnown RBP5.18□□□□□ -1.58
SMG6-219ENST00000575663 CD1DP15813 335 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 DDX5P17844 614 aaKnown RBP5.18□□□□□ -1.58
SMG6-219ENST00000575663 EPHA1P21709 976 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 ELK4P28324 431 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 ARL1P40616 181 aaPredicted RBP5.18□□□□□ -1.58
SMG6-219ENST00000575663 OR3A2P47893 321 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 ALDH9A1P49189 494 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 ZNF83P51522 516 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 DR1Q01658 176 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 POU4F1Q01851 419 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 GABPB1Q06547 395 aaPredicted RBP5.18□□□□□ -1.58
SMG6-219ENST00000575663 RASGEF1BQ0VAM2 473 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 OR4D1Q15615 310 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 ZNHIT3Q15649 155 aaPredicted RBP5.18□□□□□ -1.58
SMG6-219ENST00000575663 CPSF6Q16630 551 aaKnown RBP eCLIP5.18□□□□□ -1.58
SMG6-219ENST00000575663 ZSWIM7Q19AV6 140 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 ZNF628Q5EBL2 1059 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 ARL13AQ5H913 290 aaPredicted RBP5.18□□□□□ -1.58
SMG6-219ENST00000575663 TEX35Q5T0J7 233 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 CCDC137Q6PK04 289 aaKnown RBP5.18□□□□□ -1.58
SMG6-219ENST00000575663 FCRLAQ7L513 359 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 CROCCP2Q86T23 111 aa5.18□□□□□ -1.58
SMG6-219ENST00000575663 SAMD14Q8IZD0 417 aaPredicted RBP5.18□□□□□ -1.58
SMG6-219ENST00000575663 NOA1Q8NC60 698 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms