RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 KIAA1324LA8MWY0 1029 aaPredicted RBP9.33□□□□□ -0.92
TVP23B-208ENST00000575261 NPIPB8E9PQR5 432 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 SLC28A1O00337 649 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 SCDO00767 359 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 RGS14O43566 566 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 TBX19O60806 448 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 KCNK2O95069 426 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 PROCP04070 461 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 PABPC4LP0CB38 370 aaKnown RBP9.33□□□□□ -0.92
TVP23B-208ENST00000575261 ACP2P11117 423 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 NEFHP12036 1026 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 ELK4P28324 431 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 LCN1P31025 176 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 SERPINB4P48594 390 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 MANFP55145 182 aaKnown RBP9.33□□□□□ -0.92
TVP23B-208ENST00000575261 DNAJB13P59910 316 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 KIAA0040Q15053 153 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 CCDC153Q494R4 210 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 ZNF385BQ569K4 471 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 CPTPQ5TA50 214 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 CLEC6AQ6EIG7 209 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 GTF2IRD2BQ6EKJ0 949 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 ANKRD26P1Q6NSI1 321 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 MFSD12Q6NUT3 480 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 ZCCHC12Q6PEW1 402 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 FIGNL1Q6PIW4 674 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 GTF2IRD2Q86UP8 949 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 COX18Q8N8Q8 333 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 SLC16A11Q8NCK7 471 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 NUP43Q8NFH3 380 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 STEAP2Q8NFT2 490 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 OR6Y1Q8NGX8 325 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 OR4C3Q8NH37 302 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 RNF128Q8TEB7 428 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 JADE3Q92613 823 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 GIMAP5Q96F15 307 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 SH3YL1Q96HL8 342 aaPredicted RBP9.33□□□□□ -0.92
TVP23B-208ENST00000575261 NPAS1Q99742 590 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 TACO1Q9BSH4 297 aaKnown RBP9.33□□□□□ -0.92
TVP23B-208ENST00000575261 TMEM204Q9BSN7 226 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 REEP4Q9H6H4 257 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 C12orf49Q9H741 205 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 LRTM1Q9HBL6 345 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 TNFRSF12AQ9NP84 129 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 UBQLN4Q9NRR5 601 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 SH3BP4Q9P0V3 963 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 NTMQ9P121 344 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 CCL27Q9Y4X3 112 aa9.33□□□□□ -0.92
TVP23B-208ENST00000575261 SONP18583 2426 aaKnown RBP9.32□□□□□ -0.92
TVP23B-208ENST00000575261 A0A0J9YW62 118 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 A0A1W2PQD3 144 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 HSPA4LO95757 839 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 PLAUP00749 431 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 OPN1LWP04000 364 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 ALOX5P09917 674 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 DDX5P17844 614 aaKnown RBP9.32□□□□□ -0.92
TVP23B-208ENST00000575261 SDC1P18827 310 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 EIF1P41567 113 aaKnown RBP9.32□□□□□ -0.92
TVP23B-208ENST00000575261 FRKP42685 505 aaPredicted RBP9.32□□□□□ -0.92
TVP23B-208ENST00000575261 PRIM2P49643 509 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 RPS4XP62701 263 aaKnown RBP9.32□□□□□ -0.92
TVP23B-208ENST00000575261 RPL38P63173 70 aaKnown RBP9.32□□□□□ -0.92
TVP23B-208ENST00000575261 ZNF844Q08AG5 666 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 PDE7AQ13946 482 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 RNPS1Q15287 305 aaKnown RBP9.32□□□□□ -0.92
TVP23B-208ENST00000575261 ETFDHQ16134 617 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 ZNF239Q16600 458 aaKnown RBP9.32□□□□□ -0.92
TVP23B-208ENST00000575261 DUSP5Q16690 384 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 TMEM201Q5SNT2 666 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 LIPMQ5VYY2 423 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 RNF165Q6ZSG1 346 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 ZAR1Q86SH2 424 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 TRABD2AQ86V40 505 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 IFT20Q8IY31 132 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 LILRA2Q8N149 483 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 CEP112Q8N8E3 955 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 CCDC63Q8NA47 563 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 B4GALNT2Q8NHY0 566 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 FAM110BQ8TC76 370 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 AKAP1Q92667 903 aaKnown RBP eCLIP9.32□□□□□ -0.92
TVP23B-208ENST00000575261 CPNE4Q96A23 557 aaPredicted RBP9.32□□□□□ -0.92
TVP23B-208ENST00000575261 REXO5Q96IC2 774 aaKnown RBP9.32□□□□□ -0.92
TVP23B-208ENST00000575261 FCRL1Q96LA6 429 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 TSSK3Q96PN8 268 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 NGBQ9NPG2 151 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 TIGARQ9NQ88 270 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 ACSS1Q9NUB1 689 aaPredicted RBP9.32□□□□□ -0.92
TVP23B-208ENST00000575261 OXSMQ9NWU1 459 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 KLHL13Q9P2N7 655 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 LAMP3Q9UQV4 416 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 TMED5Q9Y3A6 229 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 RNF115Q9Y4L5 304 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 SNX8Q9Y5X2 465 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 PTGDR2Q9Y5Y4 395 aa9.32□□□□□ -0.92
TVP23B-208ENST00000575261 CUBNO60494 3623 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 A0A1W2PPM1 405 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 GJE1A6NN92 205 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 KIF2AO00139 706 aaPredicted RBP9.31□□□□□ -0.92
TVP23B-208ENST00000575261 AZIN1O14977 448 aa9.31□□□□□ -0.92
TVP23B-208ENST00000575261 AKAP10O43572 662 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms