RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 NLGN3Q9NZ94 848 aa21.91■■□□□ 1.1
NPLOC4-217ENST00000574897 YARS2Q9Y2Z4 477 aaKnown RBP21.91■■□□□ 1.1
NPLOC4-217ENST00000574897 CDH10Q9Y6N8 788 aa21.91■■□□□ 1.1
NPLOC4-217ENST00000574897 IFI30P13284 250 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 GCGRP47871 477 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 FAM53BQ14153 422 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 ZNF267Q14586 743 aaPredicted RBP21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 KCNAB1Q14722 419 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 MINDY4Q4G0A6 757 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 B3GLCTQ6Y288 498 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 PHC2Q8IXK0 858 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 OR4F15Q8NGB8 312 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 TMEM239Q8WW34 195 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 TM9SF4Q92544 642 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 RBM18Q96H35 190 aaKnown RBP21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 SPRTNQ9H040 489 aaPredicted RBP21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 RERGLQ9H628 205 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 PRTFDC1Q9NRG1 225 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 CCDC59Q9P031 241 aaKnown RBP21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 HYKKA2RU49 373 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 SRPX2O60687 465 aaPredicted RBP21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 MLLT3P42568 568 aaPredicted RBP21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 CDH11P55287 796 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 SMAD2Q15796 467 aaKnown RBP21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 TIMM50Q3ZCQ8 353 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 RNLSQ5VYX0 342 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 NPSR1Q6W5P4 371 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 GATAD2BQ8WXI9 593 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 HOXB13Q92826 284 aaPredicted RBP21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 TMEM203Q969S6 136 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 POLE4Q9NR33 117 aa21.9■■□□□ 1.1
NPLOC4-217ENST00000574897 PGDP52209 483 aa21.89■■□□□ 1.1
NPLOC4-217ENST00000574897 KLHL22Q53GT1 634 aa21.89■■□□□ 1.1
NPLOC4-217ENST00000574897 AADACL4Q5VUY2 407 aa21.89■■□□□ 1.1
NPLOC4-217ENST00000574897 OTULINQ96BN8 352 aa21.89■■□□□ 1.1
NPLOC4-217ENST00000574897 KCNS3Q9BQ31 491 aa21.89■■□□□ 1.1
NPLOC4-217ENST00000574897 OR52D1Q9H346 318 aa21.89■■□□□ 1.1
NPLOC4-217ENST00000574897 UBQLN3Q9H347 655 aa21.89■■□□□ 1.1
NPLOC4-217ENST00000574897 NDUFB11Q9NX14 153 aa21.89■■□□□ 1.1
NPLOC4-217ENST00000574897 FLRT3Q9NZU0 649 aa21.89■■□□□ 1.1
NPLOC4-217ENST00000574897 RP1P56715 2156 aa21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 CACNA1IQ9P0X4 2223 aa21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 SOCS6O14544 535 aa21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 AQP9O43315 295 aa21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 COQ9O75208 318 aa21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 RFPL3O75679 317 aa21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 CD40LGP29965 261 aa21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 FNTBP49356 437 aa21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 CSNK1EP49674 416 aaKnown RBP21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 RACK1P63244 317 aaKnown RBP21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 MLLT11Q13015 90 aaPredicted RBP21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 C1DQ13901 141 aaKnown RBP21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 LHFPL3Q86UP9 236 aa21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 ASPNQ9BXN1 380 aa21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 FGF20Q9NP95 211 aaPredicted RBP21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 HINT3Q9NQE9 182 aaKnown RBP21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 MRPS18AQ9NVS2 196 aaKnown RBP21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 SIDT1Q9NXL6 827 aaKnown RBP21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 SPIN1Q9Y657 262 aaPredicted RBP21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 MAU2Q9Y6X3 613 aa21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 MPDZO75970 2070 aa21.89■■□□□ 1.09
NPLOC4-217ENST00000574897 UNC119BA6NIH7 251 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 CTNSO60931 367 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 AK1P00568 194 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 LIMS3P0CW19 117 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 LIMS4P0CW20 117 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 MYL12AP19105 171 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 ENDOUP21128 410 aaKnown RBP21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 RPS19P39019 145 aaKnown RBP21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 TGM4P49221 684 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 RAB40BQ12829 278 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 C3orf38Q5JPI3 329 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 SLC35F1Q5T1Q4 408 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 FAM174AQ8TBP5 190 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 VSTM2LQ96N03 204 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 LMF2Q9BU23 707 aaKnown RBP21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 ERVK-19Q9WJR5 959 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 LILRA5A6NI73 299 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 DNASE1L3Q13609 305 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 SMARCD3Q6STE5 483 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 ZFP41Q8N8Y5 198 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 RCBTB1Q8NDN9 531 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 OR2T33Q8NG76 320 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 OR13C2Q8NGS9 318 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 FANK1Q8TC84 345 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 MED20Q9H944 212 aa21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 MEPEQ9NQ76 525 aaPredicted RBP21.88■■□□□ 1.09
NPLOC4-217ENST00000574897 ARID1BQ8NFD5 2236 aaPredicted RBP21.87■■□□□ 1.09
NPLOC4-217ENST00000574897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.87■■□□□ 1.09
NPLOC4-217ENST00000574897 ZC3H12DA2A288 527 aaKnown RBP21.87■■□□□ 1.09
NPLOC4-217ENST00000574897 HYAL3O43820 417 aaPredicted RBP21.87■■□□□ 1.09
NPLOC4-217ENST00000574897 NSA2O95478 260 aaKnown RBP21.87■■□□□ 1.09
NPLOC4-217ENST00000574897 IL9P15248 144 aa21.87■■□□□ 1.09
NPLOC4-217ENST00000574897 DRD5P21918 477 aa21.87■■□□□ 1.09
NPLOC4-217ENST00000574897 PSMA1P25786 263 aaKnown RBP21.87■■□□□ 1.09
NPLOC4-217ENST00000574897 TRIM16LQ309B1 348 aa21.87■■□□□ 1.09
NPLOC4-217ENST00000574897 NDUFAF6Q330K2 333 aa21.87■■□□□ 1.09
NPLOC4-217ENST00000574897 THSD4Q6ZMP0 1018 aa21.87■■□□□ 1.09
NPLOC4-217ENST00000574897 CPOQ8IVL8 374 aa21.87■■□□□ 1.09
NPLOC4-217ENST00000574897 TOR1AIP2Q8NFQ8 470 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms