RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 NPTX1Q15818 432 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 MEP1AQ16819 746 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 LRRC36Q1X8D7 754 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 SWT1Q5T5J6 900 aaKnown RBP22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 ZNF468Q5VIY5 522 aaPredicted RBP22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 IZUMO2Q6UXV1 221 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 DEF8Q6ZN54 512 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 PIWIL3Q7Z3Z3 882 aaKnown RBP22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 MARCH3Q86UD3 253 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 BEST3Q8N1M1 668 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 GALNT16Q8N428 558 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 GRHL3Q8TE85 626 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 GATA6Q92908 595 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 TMCO6Q96DC7 493 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 TBL1XR1Q9BZK7 514 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 ING2Q9H160 280 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 SEMA6AQ9H2E6 1030 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 ARMC7Q9H6L4 198 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 SCO2O43819 266 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 CST1P01037 141 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 CSTAP01040 98 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 UBTFL6P0CB48 400 aaPredicted RBP22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 ATP6AP1Q15904 470 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 DEFB109BQ30KR1 87 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 CMPK2Q5EBM0 449 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 FNDC7Q5VTL7 733 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 PHOSPHO1Q8TCT1 267 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 ZNF300Q96RE9 604 aaPredicted RBP22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 ZNF184Q99676 751 aaPredicted RBP22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 ANKRD10Q9NXR5 420 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 DNAJB12Q9NXW2 375 aaKnown RBP22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 ENPP4Q9Y6X5 453 aa22.04■■□□□ 1.12
ATPAF1-213ENST00000574428 ZFHX4Q86UP3 3567 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 DOCK10Q96BY6 2186 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 C17orf51A8MQB3 221 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 J3KTA2 159 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 CYP7B1O75881 506 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 GKN3PP0CG01 181 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 PRG2P13727 222 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 ACADSP16219 412 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 OGFRL1Q5TC84 451 aaPredicted RBP22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 BICRALQ6AI39 1079 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 SPACA3Q8IXA5 215 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 CMIPQ8IY22 773 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 OIT3Q8WWZ8 545 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 TTC9Q92623 222 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 PRR14Q9BWN1 585 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 VCX3BQ9H321 246 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 TEKT2Q9UIF3 430 aa22.03■■□□□ 1.12
ATPAF1-213ENST00000574428 ALG1L2C9J202 215 aa22.02■■□□□ 1.12
ATPAF1-213ENST00000574428 CLOCKO15516 846 aa22.02■■□□□ 1.12
ATPAF1-213ENST00000574428 OIP5O43482 229 aa22.02■■□□□ 1.12
ATPAF1-213ENST00000574428 SEMA7AO75326 666 aa22.02■■□□□ 1.12
ATPAF1-213ENST00000574428 LDLRP01130 860 aa22.02■■□□□ 1.12
ATPAF1-213ENST00000574428 RPSAP08865 295 aaKnown RBP22.02■■□□□ 1.12
ATPAF1-213ENST00000574428 DCBLD2Q96PD2 775 aa22.02■■□□□ 1.12
ATPAF1-213ENST00000574428 KLHL4Q9C0H6 718 aa22.02■■□□□ 1.12
ATPAF1-213ENST00000574428 STMN3Q9NZ72 180 aa22.02■■□□□ 1.12
ATPAF1-213ENST00000574428 SLC35A3Q9Y2D2 325 aa22.02■■□□□ 1.12
ATPAF1-213ENST00000574428 H3BNH8 94 aa22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 UBL4AP11441 157 aa22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 ITGA2P17301 1181 aa22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 HOXD11P31277 338 aaPredicted RBP22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 EIF2S3P41091 472 aaKnown RBP22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 ZNF136P52737 540 aa22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 ABHD17BQ5VST6 288 aa22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 GRAMD2AQ8IUY3 354 aa22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 GALNT9Q9HCQ5 603 aa22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 HPF1Q9NWY4 346 aa22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 GPR83Q9NYM4 423 aa22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 NTNG1Q9Y2I2 539 aa22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 CHCHD2Q9Y6H1 151 aaPredicted RBP22.02■■□□□ 1.11
ATPAF1-213ENST00000574428 NINQ8N4C6 2090 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 A0A1W2PQD3 144 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 ADAM10O14672 748 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 TP53I11O14683 189 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 NDUFB5O43674 189 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 TPST2O60704 377 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 DEAF1O75398 565 aaPredicted RBP22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 ANGPTL1O95841 491 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 ADH7P40394 386 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 OR2T5Q6IEZ7 315 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 TSPYL5Q86VY4 417 aaPredicted RBP22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 OR2T29Q8NH02 315 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 CTPS2Q9NRF8 586 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 VNN3Q9NY84 501 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 KLRF1Q9NZS2 232 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 DNAJB9Q9UBS3 223 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 CARD8Q9Y2G2 431 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 SSUH2Q9Y2M2 353 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 FAM32AQ9Y421 112 aaKnown RBP22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 TESMINQ9Y4I5 508 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 MED13Q9UHV7 2174 aa22.01■■□□□ 1.11
ATPAF1-213ENST00000574428 APC2O95996 2303 aa22■■□□□ 1.11
ATPAF1-213ENST00000574428 C2orf72A6NCS6 295 aa22■■□□□ 1.11
ATPAF1-213ENST00000574428 GTPBP1O00178 669 aaKnown RBP22■■□□□ 1.11
ATPAF1-213ENST00000574428 GNGT2O14610 69 aa22■■□□□ 1.11
ATPAF1-213ENST00000574428 PEX1O43933 1283 aa22■■□□□ 1.11
ATPAF1-213ENST00000574428 F10P00742 488 aa22■■□□□ 1.11
ATPAF1-213ENST00000574428 GANABQ14697 944 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms