RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 ADGRE4PQ86SQ3 457 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 LACC1Q8IV20 430 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 MIER2Q8N344 545 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 ZPLD1Q8TCW7 415 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 THOC1Q96FV9 657 aaKnown RBP25.09■■□□□ 1.61
SCARF1-207ENST00000573867 CCDC28BQ9BUN5 200 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 ZNF350Q9GZX5 532 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 VDAC3Q9Y277 283 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 ZNF337Q9Y3M9 751 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 CD8B2A6NJW9 211 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 DUXAA6NLW8 204 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 H0Y3Z8 333 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 H0YC42 278 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 IL6P05231 212 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 MRPL19P49406 292 aaKnown RBP25.08■■□□□ 1.61
SCARF1-207ENST00000573867 POLR2JP52435 117 aaKnown RBP25.08■■□□□ 1.61
SCARF1-207ENST00000573867 TPD52P55327 224 aaPredicted RBP25.08■■□□□ 1.61
SCARF1-207ENST00000573867 ZNF117Q03924 483 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 NDUFAF6Q330K2 333 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 TIGD2Q4W5G0 525 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 ZNF621Q6ZSS3 439 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 RNF130Q86XS8 419 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 XAGE5Q8WWM1 108 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 VPS33AQ96AX1 596 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 CHST11Q9NPF2 352 aa25.08■■□□□ 1.61
SCARF1-207ENST00000573867 NPDC1Q9NQX5 325 aaPredicted RBP25.08■■□□□ 1.61
SCARF1-207ENST00000573867 TNFRSF21O75509 655 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 CD1EP15812 388 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 GTDC1Q4AE62 458 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 COX20Q5RI15 118 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 POMZP3Q6PJE2 187 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 CBLN3Q6UW01 205 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 FUNDC1Q8IVP5 155 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 MISPQ8IVT2 679 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 C9orf106Q8NAJ2 232 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 ACBD4Q8NC06 268 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 PNPT1Q8TCS8 783 aaKnown RBP25.07■■□□□ 1.6
SCARF1-207ENST00000573867 PHOSPHO1Q8TCT1 267 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 HOXD1Q9GZZ0 328 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 MKLN1Q9UL63 735 aa25.07■■□□□ 1.6
SCARF1-207ENST00000573867 FAM234BA2RU67 622 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 MBD3L4A6NDZ8 208 aaPredicted RBP25.06■■□□□ 1.6
SCARF1-207ENST00000573867 MBD3L3A6NE82 208 aaPredicted RBP25.06■■□□□ 1.6
SCARF1-207ENST00000573867 MBD3L5A6NJ08 208 aaPredicted RBP25.06■■□□□ 1.6
SCARF1-207ENST00000573867 CLCA1A8K7I4 914 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 HMGN4O00479 90 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 RFXANKO14593 260 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 EDF1O60869 148 aaKnown RBP25.06■■□□□ 1.6
SCARF1-207ENST00000573867 AK1P00568 194 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 SNRPB2P08579 225 aaKnown RBP25.06■■□□□ 1.6
SCARF1-207ENST00000573867 MSX1P28360 303 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 TIMP3P35625 211 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 KHKP50053 298 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 SUCLG1P53597 346 aaKnown RBP25.06■■□□□ 1.6
SCARF1-207ENST00000573867 LRRC74AQ0VAA2 488 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 GPR68Q15743 365 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 BCL2A1Q16548 175 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 PLPPR5Q32ZL2 321 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 GLYR1Q49A26 553 aaPredicted RBP25.06■■□□□ 1.6
SCARF1-207ENST00000573867 PDZK1Q5T2W1 519 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 C16orf62Q7Z3J2 963 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 B4GALNT2Q8NHY0 566 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 RFWD2Q8NHY2 731 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 MBD3L2Q8NHZ7 208 aaPredicted RBP25.06■■□□□ 1.6
SCARF1-207ENST00000573867 MARVELD3Q96A59 401 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 ZNF524Q96C55 264 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 NMUR2Q9GZQ4 415 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 ACBD3Q9H3P7 528 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 CALHM2Q9HA72 323 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 MED17Q9NVC6 651 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 CLCF1Q9UBD9 225 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 CARD8Q9Y2G2 431 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 DTNAQ9Y4J8 743 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 FBN2P35556 2912 aa25.06■■□□□ 1.6
SCARF1-207ENST00000573867 MAST4O15021 2626 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 HCRTR2O43614 444 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 STX11O75558 287 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 PRF1P14222 555 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 POU3F2P20265 443 aaPredicted RBP25.05■■□□□ 1.6
SCARF1-207ENST00000573867 ZNF136P52737 540 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 MVDP53602 400 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 CLDN20P56880 219 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 RCAN2Q14206 197 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 MAPK14Q16539 360 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 TYW3Q6IPR3 259 aaKnown RBP25.05■■□□□ 1.6
SCARF1-207ENST00000573867 UBQLNLQ8IYU4 475 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 ZNF614Q8N883 585 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 ZNF527Q8NB42 609 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 RELL2Q8NC24 303 aaPredicted RBP25.05■■□□□ 1.6
SCARF1-207ENST00000573867 ZFP90Q8TF47 636 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 ROPN1LQ96C74 230 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 PIGQQ9BRB3 760 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 EXD2Q9NVH0 621 aa25.05■■□□□ 1.6
SCARF1-207ENST00000573867 UQCRHLA0A096LP55 91 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 FAM47E-STBD1D6RA91 191 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 H3BML4 177 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 HNRNPRO43390 633 aaKnown RBP25.04■■□□□ 1.6
SCARF1-207ENST00000573867 KIAA0513O60268 411 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 UGT2B17O75795 530 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 PEPDP12955 493 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms