RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 GKN3PP0CG01 181 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 POU2F1P14859 743 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 NAGAP17050 411 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 GGT2P36268 569 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 RPL5P46777 297 aaKnown RBP11.87□□□□□ -0.51
PRPF8-207ENST00000573681 NRG3P56975 720 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 RNF4P78317 190 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 HOXC5Q00444 222 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 CD47Q08722 323 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 RAPSNQ13702 412 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 PAPD4Q6PIY7 484 aaKnown RBP11.87□□□□□ -0.51
PRPF8-207ENST00000573681 KLHL17Q6TDP4 642 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 MBOAT2Q6ZWT7 520 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 PRICKLE2Q7Z3G6 844 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 ZER1Q7Z7L7 766 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 C9orf40Q8IXQ3 194 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 ZNF614Q8N883 585 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 LSMEM1Q8N8F7 131 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 ZNF441Q8N8Z8 693 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 NUBPLQ8TB37 319 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 PIGXQ8TBF5 258 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 DEPDC7Q96QD5 511 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 GAL3ST4Q96RP7 486 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 RYDENQ9NUL5 291 aaKnown RBP11.87□□□□□ -0.51
PRPF8-207ENST00000573681 NDUFA13Q9P0J0 144 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 REV1Q9UBZ9 1251 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 PCDHGA3Q9Y5H0 932 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 ASXL3Q9C0F0 2248 aa11.87□□□□□ -0.51
PRPF8-207ENST00000573681 RP1P56715 2156 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 CCDC187A0A096LP49 1063 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 IGHV3-20A0A0C4DH32 117 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 A0A1W2PQD3 144 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 DPPA5A6NC42 116 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 MPZL2O60487 215 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 ABCB7O75027 752 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 CSO75390 466 aaKnown RBP11.86□□□□□ -0.51
PRPF8-207ENST00000573681 ZFAND5O76080 213 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 UTS2O95399 124 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 CSTAP01040 98 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 CCDC159P0C7I6 412 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 JMJD7P0C870 316 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 SMIM18P0DKX4 95 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 CYP4B1P13584 511 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 PRG2P13727 222 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 IL12BP29460 328 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 STAT5AP42229 794 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 NR1H2P55055 460 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 TEKQ02763 1124 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 TSPAN31Q12999 210 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 NCF4Q15080 339 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 PTGES3Q15185 160 aaKnown RBP11.86□□□□□ -0.51
PRPF8-207ENST00000573681 TRIP6Q15654 476 aaKnown RBP11.86□□□□□ -0.51
PRPF8-207ENST00000573681 NNATQ16517 81 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 MEP1AQ16819 746 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 CCDC157Q569K6 752 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 TMEM164Q5U3C3 297 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 C6orf15Q6UXA7 325 aaPredicted RBP11.86□□□□□ -0.51
PRPF8-207ENST00000573681 PIP4P1Q86T03 277 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 CDK20Q8IZL9 346 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 EFHD2Q96C19 240 aaPredicted RBP11.86□□□□□ -0.51
PRPF8-207ENST00000573681 RNF31Q96EP0 1072 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 MPP4Q96JB8 637 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 CCNL2Q96S94 520 aaPredicted RBP11.86□□□□□ -0.51
PRPF8-207ENST00000573681 WDR77Q9BQA1 342 aaPredicted RBP11.86□□□□□ -0.51
PRPF8-207ENST00000573681 FAM117AQ9C073 453 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 ADNPQ9H2P0 1102 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 AKIRIN1Q9H9L7 192 aaPredicted RBP11.86□□□□□ -0.51
PRPF8-207ENST00000573681 POLR1BQ9H9Y6 1135 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 EXOSC3Q9NQT5 275 aaKnown RBP11.86□□□□□ -0.51
PRPF8-207ENST00000573681 CTPS2Q9NRF8 586 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 DNAJB12Q9NXW2 375 aaKnown RBP11.86□□□□□ -0.51
PRPF8-207ENST00000573681 SCN3BQ9NY72 215 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 B3GALT1Q9Y5Z6 326 aa11.86□□□□□ -0.51
PRPF8-207ENST00000573681 HTR3EA5X5Y0 456 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 TRIM64CA6NLI5 447 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 ZAR1LA6NP61 321 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 GTPBP1O00178 669 aaKnown RBP11.85□□□□□ -0.51
PRPF8-207ENST00000573681 GDF9O60383 454 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 STK17BO94768 372 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 LYPD3O95274 346 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 RAB40ALP0C0E4 278 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 MMP11P24347 488 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 CHMP24386 653 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 HTR2AP28223 471 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 EPHA2P29317 976 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 RBM34P42696 430 aaKnown RBP11.85□□□□□ -0.51
PRPF8-207ENST00000573681 ACAA2P42765 397 aaKnown RBP11.85□□□□□ -0.51
PRPF8-207ENST00000573681 HLCSP50747 726 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 SLC26A5P58743 744 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 CDC42P60953 191 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 COPZ1P61923 177 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 PLCXD2Q0VAA5 305 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 TCF15Q12870 199 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 APOFQ13790 326 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 EFR3AQ14156 821 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 MAD2L1BPQ15013 274 aaPredicted RBP11.85□□□□□ -0.51
PRPF8-207ENST00000573681 FAM199XQ6PEV8 388 aaPredicted RBP11.85□□□□□ -0.51
PRPF8-207ENST00000573681 ULK3Q6PHR2 472 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 SLCO6A1Q86UG4 719 aa11.85□□□□□ -0.51
PRPF8-207ENST00000573681 NKAIN4Q8IVV8 208 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms