RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TMEM17Q86X19 198 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 ZFAND4Q86XD8 727 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 CACUL1Q86Y37 369 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 APRG1Q8IVJ8 170 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 GID4Q8IVV7 300 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 GSPT2Q8IYD1 628 aaKnown RBP4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 TMEM132CQ8N3T6 1108 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 FAM89BQ8N5H3 189 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 JAGN1Q8N5M9 183 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 POC1AQ8NBT0 407 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 OR2L8Q8NGY9 312 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 LGALS14Q8TCE9 139 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 TCP10LQ8TDR4 215 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 ZNF473Q8WTR7 871 aaKnown RBP4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 CA5BP1Q8WTZ4 195 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 RNF133Q8WVZ7 376 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 IRGQQ8WZA9 623 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 RNF170Q96K19 258 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 MBOAT4Q96T53 435 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 CGREF1Q99674 301 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 GPR174Q9BXC1 333 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 FAM49AQ9H0Q0 323 aaPredicted RBP4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 SLITRK2Q9H156 845 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 SEMA6AQ9H2E6 1030 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 C1orf198Q9H425 327 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 RHOJQ9H4E5 214 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 KIR3DX1Q9H7L2 352 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 RNF121Q9H920 327 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 AGO3Q9H9G7 860 aaKnown RBP4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 GALNT9Q9HCQ5 603 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 GPATCH2LQ9NWQ4 482 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 POLKQ9UBT6 870 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 ADAM29Q9UKF5 820 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 NUP50Q9UKX7 468 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 CACNG2Q9Y698 323 aa4.54□□□□□ -1.68
TOPBP1-210ENST00000572787 JCADQ9P266 1359 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 TRBV5-7A0A0A0MS05 114 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 HSPB6O14558 160 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 ZBTB5O15062 677 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 B4GALT5O43286 388 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 AQP9O43315 295 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 SYNGR3O43761 229 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 PFKFB2O60825 505 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 PSIP1O75475 530 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 FCN3O75636 299 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 NEURL1O76050 574 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 PAPSS2O95340 614 aaPredicted RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 NADKO95544 446 aaPredicted RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 LDOC1O95751 146 aaPredicted RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 TNNC2P02585 160 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 NR3C1P04150 777 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 ALDOBP05062 364 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 ELANEP08246 267 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 RD3LP0DJH9 198 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 NR2C1P13056 603 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 HLA-DMAP28067 261 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 HTR2CP28335 458 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 GABRR2P28476 465 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 HPCAL1P37235 193 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 GDNFP39905 211 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 EIF2S3P41091 472 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 ID1P41134 155 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 CSKP41240 450 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 NKX2-1P43699 371 aaPredicted RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 P2RY1P47900 373 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 RGS6P49758 472 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 CXCR4P61073 352 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 RPS6P62753 249 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 MRPS6P82932 125 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 EWSR1Q01844 656 aaKnown RBP eCLIP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 GUCY2DQ02846 1103 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 HHEXQ03014 270 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 KLRC3Q07444 240 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 MESP2Q0VG99 397 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 C1orf61Q13536 156 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 SERTAD2Q14140 314 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 KRT81Q14533 505 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 MEF2DQ14814 521 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 OR1C1Q15619 314 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 TSC22D1Q15714 1073 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 SPDYE7PQ495Y7 208 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 PIGGQ5H8A4 983 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 B3GNTL1Q67FW5 361 aaPredicted RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 NEPROQ6NW34 567 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 PRMT9Q6P2P2 845 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 BHLHB9Q6PI77 547 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 WDR53Q7Z5U6 358 aaPredicted RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 ERICH1Q86X53 443 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 FUNDC1Q8IVP5 155 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 TP53INP2Q8IXH6 220 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 BOD1L2Q8IYS8 172 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 LGI2Q8N0V4 545 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 KLHL36Q8N4N3 616 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 C1orf52Q8N6N3 182 aaKnown RBP4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 GPR151Q8TDV0 419 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 DTD1Q8TEA8 209 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 LRRC15Q8TF66 581 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 SLC35F5Q8WV83 523 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 TM9SF4Q92544 642 aa4.53□□□□□ -1.68
TOPBP1-210ENST00000572787 PIGTQ969N2 578 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms