RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 MAZP56270 477 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 RPS18P62269 152 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 UBE2IP63279 158 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 XIAPP98170 497 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 ACVR1Q04771 509 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 CKAP4Q07065 602 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 ZFP36L1Q07352 338 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 PNRC1Q12796 327 aaPredicted RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 CALCOCO2Q13137 446 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 PTK6Q13882 451 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 TUBB2AQ13885 445 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 NFE2L1Q14494 772 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 IL11RAQ14626 422 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 KCNJ11Q14654 390 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 MELKQ14680 651 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 PTPRCAPQ14761 206 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 MORF4L2Q15014 288 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 TMED2Q15363 201 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 PLEKHS1Q5SXH7 462 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 DCAF12Q5T6F0 453 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 GRTP1Q5TC63 336 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 NKAIN2Q5VXU1 208 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 KCTD16Q68DU8 428 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 PTRHD1Q6GMV3 140 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 NEPROQ6NW34 567 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 TTC27Q6P3X3 843 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 OTOAQ7RTW8 1153 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 OOSP2Q86WS3 158 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 KLHL7Q8IXQ5 586 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 CPSF7Q8N684 471 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 CLDN19Q8N6F1 224 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 OR13J1Q8NGT2 312 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 LCN9Q8WX39 176 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 ELMO1Q92556 727 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 TAF15Q92804 592 aaKnown RBP eCLIP3.56□□□□□ -1.84
NUP88-202ENST00000570937 DAZLQ92904 295 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 LRRC39Q96DD0 335 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 SNF8Q96H20 258 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 SGK494Q96LW2 274 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 C12orf66Q96MD2 445 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 FOPNLQ96NB1 174 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 PANX3Q96QZ0 392 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 TUBB2BQ9BVA1 445 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 DDA1Q9BW61 102 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 CARD6Q9BX69 1037 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 RTN4RQ9BZR6 473 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 RAB33BQ9H082 229 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 DDX47Q9H0S4 455 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 CCDC68Q9H2F9 335 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 SRMSQ9H3Y6 488 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 FAM96AQ9H5X1 160 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 RDH14Q9HBH5 336 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 TREX1Q9NSU2 369 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 IMP3Q9NV31 184 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 HRASLS2Q9NWW9 162 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 NPAP1Q9NZP6 1156 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 SLC23A2Q9UGH3 650 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 GNPTGQ9UJJ9 305 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 SLC7A7Q9UM01 511 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 PSMD13Q9UNM6 376 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 UTP11Q9Y3A2 253 aaKnown RBP3.56□□□□□ -1.84
NUP88-202ENST00000570937 RPS6KL1Q9Y6S9 549 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 KNL1Q8NG31 2342 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 SPEGQ15772 3267 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 FREM2Q5SZK8 3169 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 DOCK9Q9BZ29 2069 aa3.56□□□□□ -1.84
NUP88-202ENST00000570937 A0A087WV48 116 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 A0A087X002 238 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 OR6C76A6NM76 312 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 OR52A4PA6NMU1 304 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 A8MU76 341 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 E5RI56 91 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 GOLGA8MH3BSY2 632 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 AP3D1O14617 1153 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 DNALI1O14645 258 aaPredicted RBP3.55□□□□□ -1.84
NUP88-202ENST00000570937 PRMT5O14744 637 aaPredicted RBP3.55□□□□□ -1.84
NUP88-202ENST00000570937 POLR1CO15160 346 aaPredicted RBP3.55□□□□□ -1.84
NUP88-202ENST00000570937 DOK2O60496 412 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 AVILO75366 819 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 EML2O95834 649 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 MT-ND3P03897 115 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 ANKRD34CP0C6C1 535 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 FRMD6-AS1P0C7T7 363 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 FAM157CP0CG43 387 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 THRAP10827 490 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 PGAM1P18669 254 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 OGNP20774 298 aaKnown RBP3.55□□□□□ -1.84
NUP88-202ENST00000570937 RPS3P23396 243 aaKnown RBP eCLIP3.55□□□□□ -1.84
NUP88-202ENST00000570937 FOXN2P32314 431 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 SHMT2P34897 504 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 HSD17B2P37059 387 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 PNLIPRP2P54317 469 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 CLDN6P56747 220 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 CRADDP78560 199 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 CAV1Q03135 178 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 HSPA14Q0VDF9 509 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 TTLL9Q3SXZ7 439 aa3.55□□□□□ -1.84
NUP88-202ENST00000570937 ANKRD20A4Q4UJ75 823 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms