RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 HEPHL1Q6MZM0 1159 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 AAGABQ6PD74 315 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 ENPP6Q6UWR7 440 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 PLXDC2Q6UX71 529 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 DNAJC14Q6Y2X3 702 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-207ENST00000570883 ADGRE4PQ86SQ3 457 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 LACC1Q8IV20 430 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 LIX1LQ8IVB5 337 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 ACBD4Q8NC06 268 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 RAB8BQ92930 207 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 DTNBP1Q96EV8 351 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 SH3YL1Q96HL8 342 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-207ENST00000570883 PANX1Q96RD7 426 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 TRIB1Q96RU8 372 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF350Q9GZX5 532 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 PTGES2Q9H7Z7 377 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 NPDC1Q9NQX5 325 aaPredicted RBP12.13□□□□□ -0.47
RPAIN-207ENST00000570883 KCNE5Q9UJ90 142 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 MPDZO75970 2070 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 HRNRQ86YZ3 2850 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-207ENST00000570883 PRAMEF27A3QJZ7 478 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 DUXAA6NLW8 204 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 H0Y3Z8 333 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 POLR3GO15318 223 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-207ENST00000570883 FCMRO60667 390 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 TNFRSF21O75509 655 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 IL6P05231 212 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 OR12D1P0DN82 309 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 HPGDP15428 266 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 CEACAM8P31997 349 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-207ENST00000570883 CHI3L1P36222 383 aaPredicted RBP12.12□□□□□ -0.47
RPAIN-207ENST00000570883 KHKP50053 298 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 ATP12AP54707 1039 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 CLDN15P56746 228 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 SRYQ05066 204 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 NDUFAF6Q330K2 333 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 ARHGAP11BQ3KRB8 267 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 POMZP3Q6PJE2 187 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 RNF130Q86XS8 419 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 MIER2Q8N344 545 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 C9orf106Q8NAJ2 232 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 ZPLD1Q8TCW7 415 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 VPS33AQ96AX1 596 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 CCDC28BQ9BUN5 200 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 CHST11Q9NPF2 352 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 CLCF1Q9UBD9 225 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 VDAC3Q9Y277 283 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF337Q9Y3M9 751 aa12.12□□□□□ -0.47
RPAIN-207ENST00000570883 POLQO75417 2590 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 FAM234BA2RU67 622 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 MBD3L4A6NDZ8 208 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 MBD3L3A6NE82 208 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 MBD3L5A6NJ08 208 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 CLCA1A8K7I4 914 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 H0YC42 278 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 HMGN4O00479 90 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 KIAA0513O60268 411 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 EDF1O60869 148 aaKnown RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 STX11O75558 287 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 AK1P00568 194 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 SNRPB2P08579 225 aaKnown RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 PRF1P14222 555 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 CD1EP15812 388 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 POU3F2P20265 443 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 TIMP3P35625 211 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 POLR2JP52435 117 aaKnown RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 SUCLG1P53597 346 aaKnown RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 MVDP53602 400 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 TPD52P55327 224 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 LRRC74AQ0VAA2 488 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 RCAN2Q14206 197 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 BCL2A1Q16548 175 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 PLPPR5Q32ZL2 321 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 GTDC1Q4AE62 458 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 COX20Q5RI15 118 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 PDZK1Q5T2W1 519 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 CBLN3Q6UW01 205 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 C16orf62Q7Z3J2 963 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 MISPQ8IVT2 679 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF527Q8NB42 609 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 RELL2Q8NC24 303 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 MBD3L2Q8NHZ7 208 aaPredicted RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 PNPT1Q8TCS8 783 aaKnown RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 PHOSPHO1Q8TCT1 267 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 XAGE5Q8WWM1 108 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 MARVELD3Q96A59 401 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF524Q96C55 264 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 THOC1Q96FV9 657 aaKnown RBP12.11□□□□□ -0.47
RPAIN-207ENST00000570883 NMUR2Q9GZQ4 415 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 HOXD1Q9GZZ0 328 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 ACBD3Q9H3P7 528 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 MED17Q9NVC6 651 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 MKLN1Q9UL63 735 aa12.11□□□□□ -0.47
RPAIN-207ENST00000570883 PDZD2O15018 2839 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 C7orf72A4D263 438 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 FAM47E-STBD1D6RA91 191 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 H3BML4 177 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 RFXANKO14593 260 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 HNRNPRO43390 633 aaKnown RBP12.1□□□□□ -0.47
RPAIN-207ENST00000570883 HCRTR2O43614 444 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms