RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ZBTB8AQ96BR9 441 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 FRG2BQ96QU4 278 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 KLHDC3Q9BQ90 382 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 TBL1XR1Q9BZK7 514 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 NMRAL1Q9HBL8 299 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 LZTFL1Q9NQ48 299 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 MED17Q9NVC6 651 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF281Q9Y2X9 895 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 FKBP7Q9Y680 259 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 NOTCH1P46531 2555 aa9.17□□□□□ -0.94
CTDNEP1-202ENST00000570380 A0A1W2PR80 420 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 OR7A17O14581 309 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 EFNA2O43921 213 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 UTS2O95399 124 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 LTA4HP09960 611 aaKnown RBP9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 PTMSP20962 102 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 ENPP1P22413 925 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 ME2P23368 584 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 RFX3P48380 749 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 FNTAP49354 379 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 MANFP55145 182 aaKnown RBP9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 CHRNEQ04844 493 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF155Q12901 538 aaPredicted RBP9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 ILF2Q12905 390 aaKnown RBP9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 MORF4L2Q15014 288 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 PFKFB4Q16877 469 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 GRAMD1BQ3KR37 738 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 SGO1Q5FBB7 561 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 KLHL17Q6TDP4 642 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 CMC1Q7Z7K0 106 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 PEG10Q86TG7 708 aaKnown RBP9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 TRABD2AQ86V40 505 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF433Q8N7K0 673 aaPredicted RBP9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 CDYL2Q8N8U2 506 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 ANKS4BQ8N8V4 417 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 FBXO36Q8NEA4 188 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 EXOSC8Q96B26 276 aaKnown RBP9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 FBXO17Q96EF6 278 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 RBBP8Q99708 897 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 TRMOQ9BU70 441 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 FAIM2Q9BWQ8 316 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 CXorf36Q9H7Y0 433 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 NOL11Q9H8H0 719 aaKnown RBP9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 BCO1Q9HAY6 547 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 SLC12A4Q9UP95 1085 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 PCDHGB1Q9Y5G3 927 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 SLC25A15Q9Y619 301 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 ATP23Q9Y6H3 246 aa9.16□□□□□ -0.94
CTDNEP1-202ENST00000570380 IGHV3-15A0A0B4J1V0 119 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 NPIPA5A0A0B4J1W7 369 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 C9JVG2 144 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 NPIPA7E9PJI5 369 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 M0R1B8 84 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 LILRA1O75019 489 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 RAD51DO75771 328 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 IGKV1D-16P01601 117 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 TACSTD2P09758 323 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 NPIPA8P0DM63 369 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 ALDH18A1P54886 795 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 CDH15P55291 814 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 TRA2BP62995 288 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 SLC18A2Q05940 514 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 ARL13AQ5H913 290 aaPredicted RBP9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 TREML4Q6UXN2 200 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 PLD6Q8N2A8 252 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF540Q8NDQ6 660 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 ACTRT2Q8TDY3 377 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF418Q8TF45 676 aaPredicted RBP9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 HPS1Q92902 700 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 ZNF775Q96BV0 537 aaPredicted RBP9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 PSD2Q9BQI7 771 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 C1QTNF6Q9BXI9 259 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 MYOZ1Q9NP98 299 aaPredicted RBP9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 MYNNQ9NPC7 610 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 TIGARQ9NQ88 270 aa9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 FARSBQ9NSD9 589 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-202ENST00000570380 SYCE1LA8MT33 242 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 TRIM77I1YAP6 450 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 RGS14O43566 566 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 COQ9O75208 318 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 STAMBPO95630 424 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 ESRRBO95718 433 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 IL3P08700 152 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 GFAPP14136 432 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 APEX1P27695 318 aaKnown RBP9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 ARL1P40616 181 aaPredicted RBP9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 CHN2P52757 468 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 ARFIP2P53365 341 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 DVL1P1P54792 670 aaPredicted RBP9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 ARL4CP56559 192 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 HILS1P60008 231 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 PHC1P78364 1004 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 PDIA2Q13087 525 aaKnown RBP9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 IFT88Q13099 833 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 FAM219BQ5XKK7 198 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 TTC19Q6DKK2 380 aaPredicted RBP9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 RAPH1Q70E73 1250 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 FAM9CQ8IZT9 166 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 SLC43A2Q8N370 569 aa9.14□□□□□ -0.95
CTDNEP1-202ENST00000570380 C1orf52Q8N6N3 182 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms