RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 OPN3Q9H1Y3 402 aaPredicted RBP20.26■□□□□ 0.83
RBFOX1-219ENST00000569895 PIGUQ9H490 435 aa20.26■□□□□ 0.83
RBFOX1-219ENST00000569895 SIRT3Q9NTG7 399 aaPredicted RBP20.26■□□□□ 0.83
RBFOX1-219ENST00000569895 ZDHHC2Q9UIJ5 367 aa20.26■□□□□ 0.83
RBFOX1-219ENST00000569895 MCTS1Q9ULC4 181 aaKnown RBP20.26■□□□□ 0.83
RBFOX1-219ENST00000569895 EMC9Q9Y3B6 208 aa20.26■□□□□ 0.83
RBFOX1-219ENST00000569895 MPDZO75970 2070 aa20.26■□□□□ 0.83
RBFOX1-219ENST00000569895 C7orf72A4D263 438 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 SHISA8B8ZZ34 492 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 SYNGR4O95473 234 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 CGAP01215 116 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 BPGMP07738 259 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 UGT2B10P36537 528 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 MAD2L1Q13257 205 aaPredicted RBP20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 EXOSC6Q5RKV6 272 aaKnown RBP20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 MTERF4Q7Z6M4 381 aaKnown RBP20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 GGNQ86UU5 652 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 B4GALNT2Q8NHY0 566 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 PSMA8Q8TAA3 256 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 ADAMTS15Q8TE58 950 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 MOAP1Q96BY2 351 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 TUBGCP3Q96CW5 907 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 ACTRT3Q9BYD9 372 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 NEUROD4Q9HD90 331 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 FANCFQ9NPI8 374 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 MED17Q9NVC6 651 aa20.25■□□□□ 0.83
RBFOX1-219ENST00000569895 H3BNH8 94 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 CTIFO43310 598 aaKnown RBP20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 EIF1P41567 113 aaKnown RBP20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 CTBP2P56545 445 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 PTGR1Q14914 329 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 PLPPR5Q32ZL2 321 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 CCNJQ5T5M9 372 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 GTF2IRD2BQ6EKJ0 949 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 CDC73Q6P1J9 531 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 BHLHB9Q6PI77 547 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 ESPNLQ6ZVH7 1005 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 ZAR1Q86SH2 424 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 GTF2IRD2Q86UP8 949 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 NUDCD3Q8IVD9 361 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 ZNF610Q8N9Z0 462 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 OR10D3Q8NH80 312 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 AENQ8WTP8 325 aaKnown RBP20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 CDS1Q92903 461 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 CAVIN3Q969G5 261 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 COQ8BQ96D53 544 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 OTUB1Q96FW1 271 aaPredicted RBP20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 SH3YL1Q96HL8 342 aaPredicted RBP20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 GMPPAQ96IJ6 420 aaPredicted RBP20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 C3orf30Q96M34 536 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 C1orf50Q9BV19 199 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 TMEM109Q9BVC6 243 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 BHLHE41Q9C0J9 482 aaPredicted RBP20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 GLRX2Q9NS18 164 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 FBXO34Q9NWN3 711 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 KLHL28Q9NXS3 571 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 GIMAP2Q9UG22 337 aa20.24■□□□□ 0.83
RBFOX1-219ENST00000569895 MED12LQ86YW9 2145 aa20.23■□□□□ 0.83
RBFOX1-219ENST00000569895 ADAMDEC1O15204 470 aa20.23■□□□□ 0.83
RBFOX1-219ENST00000569895 CFLARO15519 480 aa20.23■□□□□ 0.83
RBFOX1-219ENST00000569895 SKAP2O75563 359 aaPredicted RBP20.23■□□□□ 0.83
RBFOX1-219ENST00000569895 AQP8O94778 261 aa20.23■□□□□ 0.83
RBFOX1-219ENST00000569895 TP53BP2Q13625 1128 aa20.23■□□□□ 0.83
RBFOX1-219ENST00000569895 WDR93Q6P2C0 686 aa20.23■□□□□ 0.83
RBFOX1-219ENST00000569895 PHOSPHO1Q8TCT1 267 aa20.23■□□□□ 0.83
RBFOX1-219ENST00000569895 RNF145Q96MT1 663 aa20.23■□□□□ 0.83
RBFOX1-219ENST00000569895 PLSCR4Q9NRQ2 329 aa20.23■□□□□ 0.83
RBFOX1-219ENST00000569895 BEX4Q9NWD9 120 aaPredicted RBP20.23■□□□□ 0.83
RBFOX1-219ENST00000569895 PRRC2AP48634 2157 aaKnown RBP20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 TYROBPO43914 113 aa20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 C6orf47O95873 294 aa20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 FOSL1P15407 271 aa20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 ADAM8P78325 824 aa20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 GUSBP1Q15486 140 aa20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 OR6K3Q8NGY3 331 aa20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 OR2V1Q8NHB1 315 aa20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 SFXN5Q8TD22 340 aa20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 ZIM3Q96PE6 472 aa20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 DUSP26Q9BV47 211 aa20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 TIGARQ9NQ88 270 aa20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 C6orf203Q9P0P8 240 aaPredicted RBP20.22■□□□□ 0.83
RBFOX1-219ENST00000569895 GTPBP1O00178 669 aaKnown RBP20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 PABPC4LP0CB38 370 aaKnown RBP20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 CREB1P16220 341 aa20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 IL11P20809 199 aa20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 CRYGSP22914 178 aa20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 EMX2Q04743 252 aa20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 FOXD4Q12950 439 aaPredicted RBP20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 SMU1Q2TAY7 513 aa20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 HBMQ6B0K9 141 aa20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 KRTCAP2Q8N6L1 136 aa20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 REXO5Q96IC2 774 aaKnown RBP20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 ADGRG7Q96K78 797 aa20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 KLHL4Q9C0H6 718 aa20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 CXorf36Q9H7Y0 433 aa20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 NOP53Q9NZM5 478 aaKnown RBP20.21■□□□□ 0.83
RBFOX1-219ENST00000569895 GJE1A6NN92 205 aa20.2■□□□□ 0.82
RBFOX1-219ENST00000569895 TNFSF11O14788 317 aa20.2■□□□□ 0.82
RBFOX1-219ENST00000569895 CXCL13O43927 109 aa20.2■□□□□ 0.82
RBFOX1-219ENST00000569895 SNUPNO95149 360 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms