RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 OR4Q3Q8NH05 313 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 GNPDA2Q8TDQ7 276 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 FAM3CQ92520 227 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 RADILQ96JH8 1075 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 MRGPRX1Q96LB2 322 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 HS6ST2Q96MM7 605 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 WDR92Q96MX6 357 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 NEDD4LQ96PU5 975 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 HRASLS2Q9NWW9 162 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CLDND1Q9NY35 253 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 MAT2BQ9NZL9 334 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 SEC14L4Q9UDX3 406 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 POU2F3Q9UKI9 436 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CLEC4AQ9UMR7 237 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 C2orf92A0A1B0GVN3 265 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 PRKNO60260 465 aaPredicted RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 PIPP12273 146 aaPredicted RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 TLX1P31314 330 aaPredicted RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 IFNGR2P38484 337 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 VSX2P58304 361 aaPredicted RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 DEFA1P59665 94 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 DEFA3P59666 94 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 RPS7P62081 194 aaKnown RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 RPS15AP62244 130 aaKnown RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CDK5Q00535 292 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 PRKCDQ05655 676 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 BAK1Q16611 211 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 LINC00299Q6ZSB3 139 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 NUP54Q7Z3B4 507 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 GHDCQ8N2G8 530 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 Q8N9G6 341 aaPredicted RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 PFN4Q8NHR9 129 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 TMEM163Q8TC26 289 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 DIO2Q92813 273 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 GAL3ST3Q96A11 431 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 RERGQ96A58 199 aaPredicted RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 ELSPBP1Q96BH3 223 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 DIRAS2Q96HU8 199 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 OR2A14Q96R47 310 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 ACTR10Q9NZ32 417 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CRNNQ9UBG3 495 aaPredicted RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 ZNF443Q9Y2A4 671 aaPredicted RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 HEBP2Q9Y5Z4 205 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 A0A1W2PQL4 384 aaPredicted RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 TCRBV21S2A2A0A5A6 115 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CD8B2A6NJW9 211 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 H0YGG7 62 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 SGK494L7N484 410 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CASKO14936 926 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CASC3O15234 703 aaKnown RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 HCRTR1O43613 425 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 FGF17O60258 216 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 LALBAP00709 142 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 MRPL3P09001 348 aaKnown RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 POU2F2P09086 479 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CD8BP10966 210 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 HOXB1P14653 301 aaPredicted RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 NAGAP17050 411 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 WNT4P56705 351 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 ARF3P61204 181 aaPredicted RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 TNFRSF17Q02223 184 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CSTF1Q05048 431 aaKnown RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 ENPP2Q13822 863 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 OCLNQ16625 522 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 TMEM92Q6UXU6 159 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 ZNF836Q6ZNA1 936 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 Q6ZSR6 202 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 NRARPQ7Z6K4 114 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 CPOQ8IVL8 374 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 DEFB119Q8N690 84 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 COX18Q8N8Q8 333 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 SFXN5Q8TD22 340 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 OR2A5Q96R48 311 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 DCLRE1CQ96SD1 692 aaKnown RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 SECISBP2Q96T21 854 aaKnown RBP8.16□□□□□ -1.1
LINC00558-201ENST00000569422 ENKD1Q9H0I2 346 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 OR51V1Q9H2C8 321 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 ANKHQ9HCJ1 492 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 DZANK1Q9NVP4 752 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 PIAS3Q9Y6X2 628 aa8.16□□□□□ -1.1
LINC00558-201ENST00000569422 C2orf16Q68DN1 1984 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 LAMA1P25391 3075 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 PRODHO43272 600 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 CSF2P04141 144 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 ACP2P11117 423 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 GSTM3P21266 225 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 NR4A2P43354 598 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 GCGRP47871 477 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 OMPP47874 163 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 LSSP48449 732 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 SRP54P61011 504 aaKnown RBP8.15□□□□□ -1.1
LINC00558-201ENST00000569422 TSPAN31Q12999 210 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 MLLT11Q13015 90 aaPredicted RBP8.15□□□□□ -1.1
LINC00558-201ENST00000569422 SELENBP1Q13228 472 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 ERV3-1Q14264 604 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 NFATC4Q14934 902 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 LARS2Q15031 903 aaKnown RBP8.15□□□□□ -1.1
LINC00558-201ENST00000569422 NDUFA9Q16795 377 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 KLHL22Q53GT1 634 aa8.15□□□□□ -1.1
LINC00558-201ENST00000569422 TMEM201Q5SNT2 666 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms