RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 RBM24Q9BX46 236 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 BTBD2Q9BX70 525 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 ACTRT3Q9BYD9 372 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 BHLHE41Q9C0J9 482 aaPredicted RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 CLEC4MQ9H2X3 399 aaPredicted RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 CENPHQ9H3R5 247 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 PIGUQ9H490 435 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 UBQLN4Q9NRR5 601 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 RASSF1Q9NS23 344 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 DNAJB12Q9NXW2 375 aaKnown RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 ASIC5Q9NY37 505 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 CRIM1Q9NZV1 1036 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 GIMAP2Q9UG22 337 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 EDARQ9UNE0 448 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 FAF1Q9UNN5 650 aaPredicted RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 RAP2CQ9Y3L5 183 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 ZNF337Q9Y3M9 751 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 ZNF175Q9Y473 711 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 SNX8Q9Y5X2 465 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 ACTL7BQ9Y614 415 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 AP4B1Q9Y6B7 739 aa4.32□□□□□ -1.72
CLK3-219ENST00000567805 MAP1AP78559 2803 aaPredicted RBP4.32□□□□□ -1.72
CLK3-219ENST00000567805 HEATR5AQ86XA9 2040 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 POLQO75417 2590 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 C7orf72A4D263 438 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 A8MXE2 369 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 ESPNB1AK53 854 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 H3BNH8 94 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 RNASET2O00584 256 aaKnown RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 MSTNO14793 375 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 CFLARO15519 480 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 SEC14L5O43304 696 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 ITM2AO43736 263 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 GMFGO60234 142 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 TNFSF13O75888 250 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 C6orf47O95873 294 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 TGM6O95932 706 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 DHRS4L1P0CG22 281 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 G6PDP11413 515 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 FCGR2AP12318 317 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 CD1EP15812 388 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 EFNA1P20827 205 aaPredicted RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 ATP6V1C1P21283 382 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 DNAJA1P31689 397 aaKnown RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 CPOXP36551 454 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 SLC1A6P48664 564 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 PCYT1AP49585 367 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 RPL14P50914 215 aaKnown RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 ZNF41P51814 821 aaPredicted RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 SUCLG1P53597 346 aaKnown RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 CLDN15P56746 228 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 CLDN8P56748 225 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 CLDN20P56880 219 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 RPS3AP61247 264 aaKnown RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 HBA1P69905 142 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 STX3Q13277 289 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 TP53BP2Q13625 1128 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 FGFBP1Q14512 234 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 PDCD2Q16342 344 aaPredicted RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 SWI5Q1ZZU3 235 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 PGS1Q32NB8 556 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 PLPPR5Q32ZL2 321 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 SPDYE7PQ495Y7 208 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 KLHL26Q53HC5 615 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 C4orf48Q5BLP8 95 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 CEP85LQ5SZL2 805 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 CCNJQ5T5M9 372 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 PLXDC2Q6UX71 529 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 MTERF4Q7Z6M4 381 aaKnown RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 ZAR1Q86SH2 424 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 LUZP2Q86TE4 346 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 GGNQ86UU5 652 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 CDC20BQ86Y33 519 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 WDR75Q8IWA0 830 aaKnown RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 GTPBP8Q8N3Z3 284 aaPredicted RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 KRTCAP2Q8N6L1 136 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 METTL25Q8N6Q8 603 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 ZNF781Q8N8C0 355 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 ZNF527Q8NB42 609 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 OR8J2Q8NGG1 315 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 OR5M1Q8NGP8 315 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 LINC01560Q8TB33 94 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 FBXO30Q8TB52 745 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 ADAMTS15Q8TE58 950 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 SMPDL3BQ92485 455 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 CDS1Q92903 461 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 ZBTB8AQ96BR9 441 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 STARD4Q96DR4 205 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 OTUB1Q96FW1 271 aaPredicted RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 CHMP6Q96FZ7 201 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 PGM2Q96G03 612 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 DACH2Q96NX9 599 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 YIPF4Q9BSR8 244 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 DUSP26Q9BV47 211 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 PINK1Q9BXM7 581 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 POLDIP3Q9BY77 421 aaKnown RBP4.31□□□□□ -1.72
CLK3-219ENST00000567805 C20orf27Q9GZN8 174 aa4.31□□□□□ -1.72
CLK3-219ENST00000567805 HOXD1Q9GZZ0 328 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms