RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 SLC46A3Q7Z3Q1 461 aa12.08□□□□□ -0.48
SMG1-213ENST00000567737 PPIL6Q8IXY8 311 aa12.08□□□□□ -0.48
SMG1-213ENST00000567737 ZNF675Q8TD23 568 aa12.08□□□□□ -0.48
SMG1-213ENST00000567737 ZBTB8AQ96BR9 441 aa12.08□□□□□ -0.48
SMG1-213ENST00000567737 RNF145Q96MT1 663 aa12.08□□□□□ -0.48
SMG1-213ENST00000567737 PFDN4Q9NQP4 134 aa12.08□□□□□ -0.48
SMG1-213ENST00000567737 AHSPQ9NZD4 102 aa12.08□□□□□ -0.48
SMG1-213ENST00000567737 ADAM29Q9UKF5 820 aa12.08□□□□□ -0.48
SMG1-213ENST00000567737 GRIP1Q9Y3R0 1128 aa12.08□□□□□ -0.48
SMG1-213ENST00000567737 PSAT1Q9Y617 370 aa12.08□□□□□ -0.48
SMG1-213ENST00000567737 NBEAL2Q6ZNJ1 2754 aa12.08□□□□□ -0.48
SMG1-213ENST00000567737 B4DSR2 109 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 FOXE1O00358 373 aaPredicted RBP12.07□□□□□ -0.48
SMG1-213ENST00000567737 KERAO60938 352 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 RAD51DO75771 328 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 ANGPTL1O95841 491 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 CD1DP15813 335 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 COX5AP20674 150 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 GIFP27352 417 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 SFTPDP35247 375 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 CSTF3Q12996 717 aaKnown RBP12.07□□□□□ -0.48
SMG1-213ENST00000567737 CPSF6Q16630 551 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMG1-213ENST00000567737 ZNF628Q5EBL2 1059 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 CPTPQ5TA50 214 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 TEX9Q8N6V9 391 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 CDYL2Q8N8U2 506 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 NUP43Q8NFH3 380 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 TOR1AIP2Q8NFQ8 470 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMG1-213ENST00000567737 SLC9A6Q92581 669 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 CNRIP1Q96F85 164 aaPredicted RBP12.07□□□□□ -0.48
SMG1-213ENST00000567737 CFAP36Q96G28 342 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 SUCNR1Q9BXA5 334 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 SRXN1Q9BYN0 137 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 MED29Q9NX70 200 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 TAS2R9Q9NYW1 312 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 NUDT4Q9NZJ9 180 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 MRTO4Q9UKD2 239 aaKnown RBP12.07□□□□□ -0.48
SMG1-213ENST00000567737 WBP11Q9Y2W2 641 aaKnown RBP12.07□□□□□ -0.48
SMG1-213ENST00000567737 SPEF1Q9Y4P9 236 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 PTGDR2Q9Y5Y4 395 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 SLC25A15Q9Y619 301 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 VWFP04275 2813 aa12.07□□□□□ -0.48
SMG1-213ENST00000567737 A0A1W2PR80 420 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 CIB4A0PJX0 185 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 C7orf72A4D263 438 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 HKR1P10072 659 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 ARAFP10398 606 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 ALDH9A1P49189 494 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 ZNF41P51814 821 aaPredicted RBP12.06□□□□□ -0.48
SMG1-213ENST00000567737 ZNF155Q12901 538 aaPredicted RBP12.06□□□□□ -0.48
SMG1-213ENST00000567737 CCNIQ14094 377 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 DECR1Q16698 335 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 MST1LQ2TV78 715 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 CYP27C1Q4G0S4 372 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 TTC27Q6P3X3 843 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 TRABD2AQ86V40 505 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 IGDCC3Q8IVU1 814 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 LILRA2Q8N149 483 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 SLC43A2Q8N370 569 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 TEX29Q8N6K0 151 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 ZNF433Q8N7K0 673 aaPredicted RBP12.06□□□□□ -0.48
SMG1-213ENST00000567737 WDR20Q8TBZ3 569 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 UBTD2Q8WUN7 234 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 ZNF681Q96N22 645 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 NPAS1Q99742 590 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 C1QTNF6Q9BXI9 259 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 HIF1ANQ9NWT6 349 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 NTMQ9P121 344 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 KLHL9Q9P2J3 617 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 PCDHB14Q9Y5E9 798 aa12.06□□□□□ -0.48
SMG1-213ENST00000567737 SUPT3HB4E1H0 165 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 UGDHO60701 494 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 SUPT3HO75486 399 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 PSMA4P25789 261 aaKnown RBP12.05□□□□□ -0.48
SMG1-213ENST00000567737 ZFP36P26651 326 aaKnown RBP12.05□□□□□ -0.48
SMG1-213ENST00000567737 RFX3P48380 749 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 RAB10P61026 200 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 PSG6Q00889 435 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 POU4F1Q01851 419 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 OCLNQ16625 522 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 ZNF100Q8IYN0 542 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 OR9A2Q8NGT5 310 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 TRPC4APQ8TEL6 797 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 FBF1Q8TES7 1133 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 TMEM186Q96B77 213 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 TSPAN17Q96FV3 270 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 FAIM2Q9BWQ8 316 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 MRPL1Q9BYD6 325 aaKnown RBP12.05□□□□□ -0.48
SMG1-213ENST00000567737 RAB1BQ9H0U4 201 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 CDC42EP4Q9H3Q1 356 aaKnown RBP12.05□□□□□ -0.48
SMG1-213ENST00000567737 RHOJQ9H4E5 214 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 BCO1Q9HAY6 547 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 PLAC1Q9HBJ0 212 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 HHATLQ9HCP6 504 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 SENP1Q9P0U3 644 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 GMPR2Q9P2T1 348 aaKnown RBP12.05□□□□□ -0.48
SMG1-213ENST00000567737 DMGDHQ9UI17 866 aaKnown RBP12.05□□□□□ -0.48
SMG1-213ENST00000567737 UTS2RQ9UKP6 389 aa12.05□□□□□ -0.48
SMG1-213ENST00000567737 TRAF6Q9Y4K3 522 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms