RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SORBS2O94875 1100 aaKnown RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 HNRNPCL4P0DMR1 293 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 CCNA2P20248 432 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 CD82P27701 267 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 HTR1EP28566 365 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 ARCN1P48444 511 aaKnown RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 NDST2P52849 883 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 OSTNP61366 133 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SEMG2Q02383 582 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 EIF3IQ13347 325 aaKnown RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SNTB1Q13884 538 aaKnown RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SYT16Q17RD7 645 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SMU1Q2TAY7 513 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 RFX4Q33E94 735 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 KLHL26Q53HC5 615 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 DCST1Q5T197 706 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 BSPRYQ5W0U4 402 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 TTC23Q5W5X9 447 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 CLVS1Q8IUQ0 354 aaPredicted RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 POGLUT1Q8NBL1 392 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 OR52E4Q8NGH9 312 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 KCTD4Q8WVF5 259 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SGCDQ92629 289 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SLCO4A1Q96BD0 722 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 NPAS2Q99743 824 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SHCBP1LQ9BZQ2 653 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 RETREG1Q9H6L5 497 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 RPF2Q9H7B2 306 aaKnown RBP3.85□□□□□ -1.79
LINC00561-201ENST00000565815 TREX1Q9NSU2 369 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 SEPT10Q9P0V9 454 aa3.85□□□□□ -1.79
LINC00561-201ENST00000565815 REV3LO60673 3130 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 CNOT1A5YKK6 2376 aaKnown RBP3.84□□□□□ -1.79
LINC00561-201ENST00000565815 PRORSD1PA6NEY8 169 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 A8MT66 165 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 MAGEB17A8MXT2 336 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 FBP2O00757 339 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 CLOCKO15516 846 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 PMS2P2O95744 297 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 LDLRP01130 860 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 OR4Q2P0C623 313 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 MBL2P11226 248 aaPredicted RBP3.84□□□□□ -1.79
LINC00561-201ENST00000565815 GFAPP14136 432 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 LBPP18428 481 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 CD9P21926 228 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 UGT1A1P22309 533 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 GPX3P22352 226 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 HOXD3P31249 432 aaPredicted RBP3.84□□□□□ -1.79
LINC00561-201ENST00000565815 ADRA1AP35348 466 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 SEC61BP60468 96 aaKnown RBP3.84□□□□□ -1.79
LINC00561-201ENST00000565815 CRADDP78560 199 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 AIMP2Q13155 320 aaKnown RBP3.84□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF846Q147U1 533 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 C16orf72Q14CZ0 275 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 RGS21Q2M5E4 152 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 CCDC92Q53HC0 331 aaPredicted RBP3.84□□□□□ -1.79
LINC00561-201ENST00000565815 RAB6CQ53S08 254 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 PRSS57Q6UWY2 283 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 MEPCEQ7L2J0 689 aaKnown RBP3.84□□□□□ -1.79
LINC00561-201ENST00000565815 CAMKMTQ7Z624 323 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 PIGZQ86VD9 579 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 GLCCI1Q86VQ1 547 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 FAM131BQ86XD5 332 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF786Q8N393 782 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 SVOPLQ8N434 492 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 CCNYL1Q8N7R7 359 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 C12orf29Q8N999 325 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 OR13F1Q8NGS4 319 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 OR10T2Q8NGX3 314 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 GIPC3Q8TF64 312 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 TMEM159Q96B96 161 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 OTULINQ96BN8 352 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 C19orf60Q96EN9 201 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 AURKBQ96GD4 344 aaPredicted RBP3.84□□□□□ -1.79
LINC00561-201ENST00000565815 PLEKHA8Q96JA3 519 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 ELMO2Q96JJ3 720 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 DNAJC1Q96KC8 554 aaKnown RBP3.84□□□□□ -1.79
LINC00561-201ENST00000565815 PSD2Q9BQI7 771 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 GPR174Q9BXC1 333 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 RTN4RQ9BZR6 473 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 RAB6CQ9H0N0 254 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 LINC00597Q9H2U6 94 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 TM9SF3Q9HD45 589 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 SDR39U1Q9NRG7 319 aaPredicted RBP3.84□□□□□ -1.79
LINC00561-201ENST00000565815 FAM49BQ9NUQ9 324 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 RHBDL2Q9NX52 303 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 TUBGCP4Q9UGJ1 667 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 LEF1Q9UJU2 399 aaPredicted RBP3.84□□□□□ -1.79
LINC00561-201ENST00000565815 FBXO5Q9UKT4 447 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 MUC3AQ02505 3323 aa3.84□□□□□ -1.79
LINC00561-201ENST00000565815 EYSQ5T1H1 3165 aa3.84□□□□□ -1.8
LINC00561-201ENST00000565815 RNF103-CHMP3A0A140T963 221 aa3.84□□□□□ -1.8
LINC00561-201ENST00000565815 ZNF840PA6NDX5 716 aa3.84□□□□□ -1.8
LINC00561-201ENST00000565815 LRRC72A6NJI9 287 aa3.84□□□□□ -1.8
LINC00561-201ENST00000565815 H3BMQ9 156 aa3.84□□□□□ -1.8
LINC00561-201ENST00000565815 XRCC3O43542 346 aa3.84□□□□□ -1.8
LINC00561-201ENST00000565815 EEDO75530 441 aaKnown RBP3.84□□□□□ -1.8
LINC00561-201ENST00000565815 WISP3O95389 354 aaPredicted RBP3.84□□□□□ -1.8
LINC00561-201ENST00000565815 PPP1R3DO95685 299 aa3.84□□□□□ -1.8
LINC00561-201ENST00000565815 OCM2P0CE71 109 aa3.84□□□□□ -1.8
LINC00561-201ENST00000565815 OCMP0CE72 109 aaPredicted RBP3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms