RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 PTTG1IPP53801 180 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 INHBCP55103 352 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ACTBP60709 375 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ACTA2P62736 377 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ACTG1P63261 375 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ACTG2P63267 376 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ACTC1P68032 377 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ACTA1P68133 377 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 RPL19P84098 196 aaKnown RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 DEFA6Q01524 100 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 HMGCS1Q01581 520 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 SLC39A6Q13433 755 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ITPRIPL2Q3MIP1 535 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 TMEM63BQ5T3F8 832 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 AGAP7PQ5VUJ5 663 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 LYPLAL1Q5VWZ2 237 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 LYSMD4Q5XG99 296 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 CD276Q5ZPR3 534 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 CERS6Q6ZMG9 384 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 NIPA1Q7RTP0 329 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 PRSS45Q7RTY3 260 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 SLC22A16Q86VW1 577 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 TMEM17Q86X19 198 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ZNF100Q8IYN0 542 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 STK40Q8N2I9 435 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 RYBPQ8N488 228 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 NUP43Q8NFH3 380 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 OR10S1Q8NGN2 331 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 MBD3L2Q8NHZ7 208 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 FAM110BQ8TC76 370 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 SLC38A5Q8WUX1 472 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 CD101Q93033 1021 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 LENG1Q96BZ8 264 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 ZNF419Q96HQ0 510 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 AGAP4Q96P64 663 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 CSPG4P5Q96PW8 444 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 XPO6Q96QU8 1125 aaKnown RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 JMJD8Q96S16 334 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ELOVL1Q9BW60 279 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 AMNQ9BXJ7 453 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ILKAPQ9H0C8 392 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 OR52A5Q9H2C5 316 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 FOXP1Q9H334 677 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 UGT1A7Q9HAW7 530 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 UGT1A8Q9HAW9 530 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 PLEKHA1Q9HB21 404 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 SLC2A9Q9NRM0 540 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ANKRD10Q9NXR5 420 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 SAE1Q9UBE0 346 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 P2RX2Q9UBL9 471 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 SLC23A1Q9UHI7 598 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 PHF11Q9UIL8 331 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ZNF346Q9UL40 294 aaKnown RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 MEMO1Q9Y316 297 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 TMED7Q9Y3B3 224 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 CENPFP49454 3210 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 MUC3AQ02505 3323 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 A0A1W2PNV4 684 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ISPDA4D126 451 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 EIF4E1BA6NMX2 242 aaKnown RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 C9orf172C9J069 976 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 M0QZQ0 153 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 VCYO14598 125 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 TCAPO15273 167 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 RAD51CO43502 376 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 SDC3O75056 442 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 MOSPD3O75425 235 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 MT-CYBP00156 380 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 CXCL10P02778 98 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 SERPINA6P08185 405 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 GIMD1P0DJR0 217 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 PRPH2P23942 346 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 MMP11P24347 488 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 DCKP27707 260 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 TACR3P29371 465 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 SDHAP31040 664 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ARRB2P32121 409 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 CYP2C18P33260 490 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 MTNR1AP48039 350 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 NDUFV1P49821 464 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 CDK16Q00536 496 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 DBPQ10586 325 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 GRM7Q14831 915 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 PDZD11Q5EBL8 140 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 RBM48Q5RL73 367 aaKnown RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 VWA1Q6PCB0 445 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 FOXR1Q6PIV2 292 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 CYP2R1Q6VVX0 501 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 TMPRSS11FQ6ZWK6 438 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 BHLHA15Q7RTS1 189 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 NOXA1Q86UR1 476 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 MEX3DQ86XN8 651 aaKnown RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 C1orf210Q8IVY1 113 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 FAM126BQ8IXS8 530 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 KIF2BQ8N4N8 673 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 ATP6V0D2Q8N8Y2 350 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 Q8N9G6 341 aaPredicted RBP2.85□□□□□ -1.95
CHD9-216ENST00000565803 DNERQ8NFT8 737 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 OR52I1Q8NGK6 324 aa2.85□□□□□ -1.95
CHD9-216ENST00000565803 OR11L1Q8NGX0 322 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms