RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 RNF144AP50876 292 aaPredicted RBP18.04■□□□□ 0.48
CLN6-205ENST00000564846 GPR143P51810 404 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 FOXL2P58012 376 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 GABARAPL2P60520 117 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 ALDH6A1Q02252 535 aaKnown RBP18.04■□□□□ 0.48
CLN6-205ENST00000564846 KLHL26Q53HC5 615 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 ZNF613Q6PF04 617 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 Q6ZPB1 254 aaPredicted RBP18.04■□□□□ 0.48
CLN6-205ENST00000564846 NKAIN4Q8IVV8 208 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 ENTHD1Q8IYW4 607 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 B3GNT7Q8NFL0 401 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 CNIH3Q8TBE1 160 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 GNPDA2Q8TDQ7 276 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 EFHD2Q96C19 240 aaPredicted RBP18.04■□□□□ 0.48
CLN6-205ENST00000564846 CDC6Q99741 560 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 CRB3Q9BUF7 120 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 STRADBQ9C0K7 418 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 TMEM27Q9HBJ8 222 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 PPIEQ9UNP9 301 aaKnown RBP18.04■□□□□ 0.48
CLN6-205ENST00000564846 SLC35A3Q9Y2D2 325 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 GPR179Q6PRD1 2367 aa18.04■□□□□ 0.48
CLN6-205ENST00000564846 WDFY4Q6ZS81 3184 aa18.03■□□□□ 0.48
CLN6-205ENST00000564846 EEF1B2P24534 225 aaKnown RBP18.03■□□□□ 0.48
CLN6-205ENST00000564846 LCN10Q6JVE6 187 aa18.03■□□□□ 0.48
CLN6-205ENST00000564846 MBOAT2Q6ZWT7 520 aa18.03■□□□□ 0.48
CLN6-205ENST00000564846 PIGXQ8TBF5 258 aa18.03■□□□□ 0.48
CLN6-205ENST00000564846 FAM81AQ8TBF8 368 aa18.03■□□□□ 0.48
CLN6-205ENST00000564846 HSPBAP1Q96EW2 488 aa18.03■□□□□ 0.48
CLN6-205ENST00000564846 LMF1Q96S06 567 aa18.03■□□□□ 0.48
CLN6-205ENST00000564846 ULBP3Q9BZM4 244 aa18.03■□□□□ 0.48
CLN6-205ENST00000564846 SEMA4CQ9C0C4 833 aa18.03■□□□□ 0.48
CLN6-205ENST00000564846 KRCC1Q9NPI7 259 aaPredicted RBP18.03■□□□□ 0.48
CLN6-205ENST00000564846 NDUFA13Q9P0J0 144 aa18.03■□□□□ 0.48
CLN6-205ENST00000564846 C19orf25Q9UFG5 118 aaPredicted RBP18.03■□□□□ 0.48
CLN6-205ENST00000564846 GPN3Q9UHW5 284 aaPredicted RBP18.03■□□□□ 0.48
CLN6-205ENST00000564846 FRYLO94915 3013 aa18.03■□□□□ 0.48
CLN6-205ENST00000564846 PRKNO60260 465 aaPredicted RBP18.02■□□□□ 0.48
CLN6-205ENST00000564846 CNOT3O75175 753 aaKnown RBP18.02■□□□□ 0.48
CLN6-205ENST00000564846 KRT20P35900 424 aa18.02■□□□□ 0.48
CLN6-205ENST00000564846 ADH7P40394 386 aa18.02■□□□□ 0.48
CLN6-205ENST00000564846 RAB15P59190 212 aa18.02■□□□□ 0.48
CLN6-205ENST00000564846 CDC42P60953 191 aa18.02■□□□□ 0.48
CLN6-205ENST00000564846 CSNK2BP67870 215 aa18.02■□□□□ 0.48
CLN6-205ENST00000564846 ZNF773Q6PK81 442 aa18.02■□□□□ 0.48
CLN6-205ENST00000564846 TMEM205Q6UW68 189 aa18.02■□□□□ 0.48
CLN6-205ENST00000564846 ZNF441Q8N8Z8 693 aa18.02■□□□□ 0.48
CLN6-205ENST00000564846 NFAM1Q8NET5 270 aaPredicted RBP18.02■□□□□ 0.48
CLN6-205ENST00000564846 TRIM2Q9C040 744 aa18.02■□□□□ 0.48
CLN6-205ENST00000564846 RNF6Q9Y252 685 aa18.02■□□□□ 0.48
CLN6-205ENST00000564846 IGHV3-20A0A0C4DH32 117 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 H3BN98 237 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 SCDO00767 359 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 RFPL3O75679 317 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 CSTAP01040 98 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 HPGDP15428 266 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 POU1F1P28069 291 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 ACAA2P42765 397 aaKnown RBP18.02■□□□□ 0.47
CLN6-205ENST00000564846 GSSP48637 474 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 IDH2P48735 452 aaKnown RBP18.02■□□□□ 0.47
CLN6-205ENST00000564846 NR0B1P51843 470 aaKnown RBP18.02■□□□□ 0.47
CLN6-205ENST00000564846 LSM11P83369 360 aaKnown RBP eCLIP18.02■□□□□ 0.47
CLN6-205ENST00000564846 PRICKLE2Q7Z3G6 844 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 SATL1Q86VE3 508 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 ZNF440Q8IYI8 595 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 RNF113BQ8IZP6 322 aaKnown RBP18.02■□□□□ 0.47
CLN6-205ENST00000564846 LSMEM1Q8N8F7 131 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 BPIFB6Q8NFQ5 453 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 TP53INP1Q96A56 240 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 LPAR4Q99677 370 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 PRSS27Q9BQR3 290 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 RASSF1Q9NS23 344 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 IMPAD1Q9NX62 359 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 TPRKBQ9Y3C4 175 aa18.02■□□□□ 0.47
CLN6-205ENST00000564846 SMIM31A0A1B0GVY4 71 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 ABCB7O75027 752 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 UTS2O95399 124 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 OMPP47874 163 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 TEKQ02763 1124 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 SPEM2Q0P670 501 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 TSPAN31Q12999 210 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 NADK2Q4G0N4 442 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 DCAF12Q5T6F0 453 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 BROXQ5VW32 411 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 CPEB2Q7Z5Q1 589 aaKnown RBP18.01■□□□□ 0.47
CLN6-205ENST00000564846 RHOXF1Q8NHV9 184 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 TMEM255BQ8WV15 326 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 MR1Q95460 341 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 UBE2FQ969M7 185 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 AKIRIN1Q9H9L7 192 aaPredicted RBP18.01■□□□□ 0.47
CLN6-205ENST00000564846 SCN3BQ9NY72 215 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 LOXL2Q9Y4K0 774 aa18.01■□□□□ 0.47
CLN6-205ENST00000564846 C9J4A7 227 aa18■□□□□ 0.47
CLN6-205ENST00000564846 MPZL2O60487 215 aa18■□□□□ 0.47
CLN6-205ENST00000564846 REM1O75628 298 aa18■□□□□ 0.47
CLN6-205ENST00000564846 LINGO3P0C6S8 592 aa18■□□□□ 0.47
CLN6-205ENST00000564846 TBXA2RP21731 343 aa18■□□□□ 0.47
CLN6-205ENST00000564846 IL12BP29460 328 aa18■□□□□ 0.47
CLN6-205ENST00000564846 ALDH3B2P48448 385 aa18■□□□□ 0.47
CLN6-205ENST00000564846 RNF4P78317 190 aa18■□□□□ 0.47
CLN6-205ENST00000564846 INSM1Q01101 510 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms