RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ZNF614Q8N883 585 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 ZNF781Q8N8C0 355 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 B4GALNT2Q8NHY0 566 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 PHOSPHO1Q8TCT1 267 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 ADAMTS15Q8TE58 950 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 DACH2Q96NX9 599 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 STACQ99469 402 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 FOXC2Q99958 501 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 KLHDC3Q9BQ90 382 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 TMEM109Q9BVC6 243 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 ACTRT3Q9BYD9 372 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 PARD6BQ9BYG5 372 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 PIGUQ9H490 435 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 HHATLQ9HCP6 504 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 DUSP22Q9NRW4 184 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 MED17Q9NVC6 651 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 KLHL28Q9NXS3 571 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 STOML1Q9UBI4 398 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 NDRG3Q9UGV2 375 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 CLEC4AQ9UMR7 237 aa15.9■□□□□ 0.14
NME3-205ENST00000563854 PCNX3Q9H6A9 2034 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 C2CD3Q4AC94 2353 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 A0A087WZY1 265 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 AQP8O94778 261 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 NUDT14O95848 222 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 PLGP00747 810 aaPredicted RBP15.89■□□□□ 0.13
NME3-205ENST00000563854 SERPINE1P05121 402 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 FCGR2AP12318 317 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 MAD2L1Q13257 205 aaPredicted RBP15.89■□□□□ 0.13
NME3-205ENST00000563854 KEAP1Q14145 624 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 TMEM44Q2T9K0 475 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 PLPPR5Q32ZL2 321 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 DCST2Q5T1A1 773 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 MISPQ8IVT2 679 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 WDR75Q8IWA0 830 aaKnown RBP15.89■□□□□ 0.13
NME3-205ENST00000563854 MREGQ8N565 214 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 OR10D3Q8NH80 312 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 ZBTB8AQ96BR9 441 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 DUSP26Q9BV47 211 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 RNF122Q9H9V4 155 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 NEUROD4Q9HD90 331 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 NOP53Q9NZM5 478 aaKnown RBP15.89■□□□□ 0.13
NME3-205ENST00000563854 PROCRQ9UNN8 238 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 KCNE3Q9Y6H6 103 aa15.89■□□□□ 0.13
NME3-205ENST00000563854 TNFSF11O14788 317 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 CXCL13O43927 109 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 RAF1P04049 648 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 HRGP04196 525 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 KRT16P08779 473 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 POU2F1P14859 743 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 ME2P23368 584 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 LCN1P31025 176 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 CD79BP40259 229 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 SLC6A8P48029 635 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 ABCE1P61221 599 aaKnown RBP15.88■□□□□ 0.13
NME3-205ENST00000563854 RPS26P62854 115 aaKnown RBP15.88■□□□□ 0.13
NME3-205ENST00000563854 EXOC3L2Q2M3D2 409 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 EXOSC6Q5RKV6 272 aaKnown RBP15.88■□□□□ 0.13
NME3-205ENST00000563854 CEP85LQ5SZL2 805 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 ZNF474Q6S9Z5 364 aaPredicted RBP15.88■□□□□ 0.13
NME3-205ENST00000563854 GTPBP8Q8N3Z3 284 aaPredicted RBP15.88■□□□□ 0.13
NME3-205ENST00000563854 NATD1Q8N6N6 113 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 TMCO5AQ8N6Q1 288 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 ZNF527Q8NB42 609 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 CHDHQ8NE62 594 aaPredicted RBP15.88■□□□□ 0.13
NME3-205ENST00000563854 OR5D16Q8NGK9 328 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 SFXN5Q8TD22 340 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 COQ8BQ96D53 544 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 MED18Q9BUE0 208 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 BHLHE41Q9C0J9 482 aaPredicted RBP15.88■□□□□ 0.13
NME3-205ENST00000563854 KCNK9Q9NPC2 374 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 C6orf203Q9P0P8 240 aaPredicted RBP15.88■□□□□ 0.13
NME3-205ENST00000563854 MCTS1Q9ULC4 181 aaKnown RBP15.88■□□□□ 0.13
NME3-205ENST00000563854 TESMINQ9Y4I5 508 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 AKAP6Q13023 2319 aa15.88■□□□□ 0.13
NME3-205ENST00000563854 A0A1W2PQD3 144 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 SYNGR4O95473 234 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 SFTPDP35247 375 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 PPP2R2AP63151 447 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 HBA1P69905 142 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 ZNF117Q03924 483 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 EMX2Q04743 252 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 FOXF1Q12946 379 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 NDUFAF6Q330K2 333 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 OR4F3Q6IEY1 312 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 ZNF550Q7Z398 422 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 RIMKLAQ8IXN7 391 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 CLECL1Q8IZS7 167 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 CLEC4FQ8N1N0 589 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 ZNF610Q8N9Z0 462 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 RFWD2Q8NHY2 731 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 ZC3HAV1LQ96H79 300 aaKnown RBP15.87■□□□□ 0.13
NME3-205ENST00000563854 OR7D2Q96RA2 312 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 PAIP2Q9BPZ3 127 aaKnown RBP15.87■□□□□ 0.13
NME3-205ENST00000563854 SLC39A3Q9BRY0 314 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 GPATCH2Q9NW75 528 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 CARD8Q9Y2G2 431 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 EMC9Q9Y3B6 208 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 MPDZO75970 2070 aa15.87■□□□□ 0.13
NME3-205ENST00000563854 H3BNH8 94 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms