RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CLEC2AQ6UVW9 174 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 Q6ZSR9 355 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 ESPNLQ6ZVH7 1005 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 RAPH1Q70E73 1250 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 BHLHA15Q7RTS1 189 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-204ENST00000563739 TDRPQ86YL5 185 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 FAM9CQ8IZT9 166 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 DEPDC4Q8N2C3 294 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 OR2L13Q8N349 312 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 TMEM151AQ8N4L1 468 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 PPM1NQ8N819 430 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 SEMA6DQ8NFY4 1073 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 OR4C3Q8NH37 302 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.14□□□□□ -0.95
SF3B3-204ENST00000563739 PYROXD1Q8WU10 500 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 HSD17B8Q92506 261 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 ZNF75CPQ92670 426 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-204ENST00000563739 FMO2Q99518 471 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 PSD2Q9BQI7 771 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 ACPTQ9BZG2 426 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 SLC35C2Q9NQQ7 365 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 GLRX2Q9NS18 164 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 MCM8Q9UJA3 840 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 MCTS1Q9ULC4 181 aaKnown RBP9.14□□□□□ -0.95
SF3B3-204ENST00000563739 C19orf53Q9UNZ5 99 aaPredicted RBP9.14□□□□□ -0.95
SF3B3-204ENST00000563739 ZNF780BQ9Y6R6 833 aa9.14□□□□□ -0.95
SF3B3-204ENST00000563739 A0A087WV62 115 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 ALG1L2C9J202 215 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 HOXB1P14653 301 aaPredicted RBP9.13□□□□□ -0.95
SF3B3-204ENST00000563739 IL32P24001 234 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 KRT20P35900 424 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 MAGEA4P43358 317 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 PRIM2P49643 509 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 CCNG1P51959 295 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 MANFP55145 182 aaKnown RBP9.13□□□□□ -0.95
SF3B3-204ENST00000563739 SLC25A3Q00325 362 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 ITGADQ13349 1161 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 FAM174BQ3ZCQ3 159 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 TEX35Q5T0J7 233 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 HBMQ6B0K9 141 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 TMEM107Q6UX40 140 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 CTAGE3PQ8IX95 158 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 GATSQ8NAP1 163 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 FBF1Q8TES7 1133 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 C16orf78Q8WTQ4 265 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 IFT81Q8WYA0 676 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 FAM168AQ92567 244 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 PIK3R3Q92569 461 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 OSTF1Q92882 214 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 KISS1RQ969F8 398 aaPredicted RBP9.13□□□□□ -0.95
SF3B3-204ENST00000563739 PHF21BQ96EK2 531 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 DTNBP1Q96EV8 351 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 APIPQ96GX9 242 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 KLHL15Q96M94 604 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 RHOXF2Q9BQY4 288 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 PRRG4Q9BZD6 226 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 GLIPR2Q9H4G4 154 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 PTGES2Q9H7Z7 377 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 BRF2Q9HAW0 419 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 CBLN4Q9NTU7 201 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 OR10H1Q9Y4A9 318 aa9.13□□□□□ -0.95
SF3B3-204ENST00000563739 HEATR1Q9H583 2144 aaKnown RBP9.13□□□□□ -0.95
SF3B3-204ENST00000563739 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 A0A096LPK6 155 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 IGHV3-15A0A0B4J1V0 119 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 CCDC189A1A4V9 331 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 STX16-NPEPL1H3BU86 382 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 MANBAO00462 879 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 UBFD1O14562 309 aaKnown RBP9.12□□□□□ -0.95
SF3B3-204ENST00000563739 STX16O14662 325 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 PCDH7O60245 1069 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 GUCY1B2O75343 617 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 OR4F21O95013 312 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 JUNP05412 331 aaKnown RBP9.12□□□□□ -0.95
SF3B3-204ENST00000563739 GSTA2P09210 222 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 ACP2P11117 423 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 H2AFXP16104 143 aaPredicted RBP9.12□□□□□ -0.95
SF3B3-204ENST00000563739 ENPP1P22413 925 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 USF1P22415 310 aaPredicted RBP9.12□□□□□ -0.95
SF3B3-204ENST00000563739 IL2RGP31785 369 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 NTF4P34130 210 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 OR3A2P47893 321 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 CDH13P55290 713 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 DSCR9P59020 149 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 LSM11P83369 360 aaKnown RBP eCLIP9.12□□□□□ -0.95
SF3B3-204ENST00000563739 SLC18A2Q05940 514 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 C17orf67Q0P5P2 114 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 IFT88Q13099 833 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 PPA1Q15181 289 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 MST1LQ2TV78 715 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 Q6ZT83 130 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 C3orf62Q6ZUJ4 267 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 STK32CQ86UX6 486 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 EXOC3L1Q86VI1 746 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 WDR75Q8IWA0 830 aaKnown RBP9.12□□□□□ -0.95
SF3B3-204ENST00000563739 IFT20Q8IY31 132 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 FAM110BQ8TC76 370 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 SELENOMQ8WWX9 145 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 CDKL2Q92772 493 aa9.12□□□□□ -0.95
SF3B3-204ENST00000563739 PROX1Q92786 737 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms