RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 NRCAMQ92823 1304 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 MEGF11A6BM72 1044 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 ARRDC5A6NEK1 342 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 GJE1A6NN92 205 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 GPRIN2O60269 458 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 MMP7P09237 267 aaPredicted RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 FDXRP22570 491 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 STXBP1P61764 594 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 MFSD13AQ14CX5 517 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 VASNQ6EMK4 673 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 TMEM150AQ86TG1 271 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 TEX26Q8N6G2 289 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 IQCF1Q8N6M8 205 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 SIDT2Q8NBJ9 832 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 CCDC54Q8NEL0 328 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 OR4M1Q8NGD0 313 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 OR56A1Q8NGH5 318 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 SYNPRQ8TBG9 265 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 NEK7Q8TDX7 302 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 ARNTL2Q8WYA1 636 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 TRMT2BQ96GJ1 504 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 OSMRQ99650 979 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 INPP5KQ9BT40 448 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 EFCAB11Q9BUY7 163 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 COLEC11Q9BWP8 271 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 CD244Q9BZW8 370 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 C20orf27Q9GZN8 174 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 HIPK2Q9H2X6 1198 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 EXOSC3Q9NQT5 275 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 ZNF586Q9NXT0 402 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 KLF15Q9UIH9 416 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 ZFC3H1O60293 1989 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 GPR89AB7ZAQ6 455 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 EIF1BO60739 113 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 GPR89BP0CG08 455 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 PCMT1P22061 227 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 POLR2IP36954 125 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 EIF1P41567 113 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 FXYD6P3P58550 94 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 YBEYP58557 167 aaPredicted RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.91□□□□□ -1.46
CLK3-212ENST00000563418 ELFN2Q5R3F8 820 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 CEACAM20Q6UY09 585 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 CBLL1Q75N03 491 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 TOP6BLQ8N6T0 577 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 BORCS7Q96B45 105 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 GAL3ST4Q96RP7 486 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 TBX5Q99593 518 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 PCBD2Q9H0N5 130 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 PCED1AQ9H1Q7 454 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 GBA2Q9HCG7 927 aaPredicted RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 KCMF1Q9P0J7 381 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 A0A1B0GV72 72 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 LGALS8O00214 317 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 OPN1SWP03999 348 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 METTL15P1P0C7V9 234 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 TAF9Q16594 264 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 TXNRD3NBQ6F5E7 133 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 FUT10Q6P4F1 479 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 SLC27A1Q6PCB7 646 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 OR6K6Q8NGW6 343 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 GLYATL1Q969I3 302 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 VAMP8Q9BV40 100 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 NIFKQ9BYG3 293 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 PTGES2Q9H7Z7 377 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 TNS2Q63HR2 1409 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 FAM166BA8MTA8 275 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 NSG1P42857 185 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 LCN6P62502 163 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 ARFRP1Q13795 201 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 PABPC1L2AQ5JQF8 200 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 PAQR3Q6TCH7 311 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 LMNTD1Q8N9Z9 388 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 NAXEQ8NCW5 288 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 OR56A3Q8NH54 315 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 RNF128Q8TEB7 428 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 SUV39H2Q9H5I1 410 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 TAS2R5Q9NYW4 299 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 ALDH1A1P00352 501 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 HOXC6P09630 235 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 ZNF763Q0D2J5 394 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 CHRFAM7AQ494W8 412 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 TMEM173Q86WV6 379 aaPredicted RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 ZNF383Q8NA42 475 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 C16orf78Q8WTQ4 265 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 C22orf15Q8WYQ4 148 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 TFAP2BQ92481 460 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 FAM83CQ9BQN1 747 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 CLSTN3Q9BQT9 956 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 POLDIP3Q9BY77 421 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 ULBP1Q9BZM6 244 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 PCDHGA6Q9Y5G7 932 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 LATO43561 262 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 CRYABP02511 175 aaKnown RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 BCHEP06276 602 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 VEGFAP15692 232 aaPredicted RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 RHOQP17081 205 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 AKR1C4P17516 323 aa5.91□□□□□ -1.46
CLK3-212ENST00000563418 CEBPAP49715 358 aaPredicted RBP5.91□□□□□ -1.46
CLK3-212ENST00000563418 EFEMP1Q12805 493 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms