RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 PCDHB10Q9UN67 800 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 CHMP2BQ9UQN3 213 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 MTO1Q9Y2Z2 717 aaKnown RBP6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 RNF11Q9Y3C5 154 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 SPEF1Q9Y4P9 236 aa6.76□□□□□ -1.33
HERPUD1-206ENST00000563343 A0A087WZY1 265 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 NPIPA5A0A0B4J1W7 369 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 A0A1W2PR80 420 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 A0A1W2PRB8 838 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 NPIPA7E9PJI5 369 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 DNALI1O14645 258 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 PLOD3O60568 738 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 PIAS1O75925 651 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 PRKD3O94806 890 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 SLU7O95391 586 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 IL33O95760 270 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 IGKV1D-16P01601 117 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 PABPC4LP0CB38 370 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 NPIPA8P0DM63 369 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 ARAFP10398 606 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 BMP4P12644 408 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 CXCR5P32302 372 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 MAPK12P53778 367 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 MANFP55145 182 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 CARD18P57730 90 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 PHC1P78364 1004 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 GALNT1Q10472 559 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 TRIP10Q15642 601 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 CARTPTQ16568 116 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 CYP27C1Q4G0S4 372 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 CCNYL2Q5T2Q4 361 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 CPTPQ5TA50 214 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 CCDC137Q6PK04 289 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 C1orf229Q6ZS94 237 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 FCRLAQ7L513 359 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 MYLK4Q86YV6 388 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 CCDC116Q8IYX3 515 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 LILRA2Q8N149 483 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 CEP112Q8N8E3 955 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 ZDHHC22Q8N966 263 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 ZNF540Q8NDQ6 660 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 OR7G2Q8NG99 324 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 OR52N5Q8NH56 324 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 SLC9A6Q92581 669 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 CPNE4Q96A23 557 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 MAGOHBQ96A72 148 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 ZBTB8AQ96BR9 441 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 CDK15Q96Q40 435 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 TRMOQ9BU70 441 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 ALG9Q9H6U8 611 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 MED17Q9NVC6 651 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 GUCA1BQ9UMX6 200 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 ACOT9Q9Y305 439 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 OR10H1Q9Y4A9 318 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 WNK1Q9H4A3 2382 aa6.75□□□□□ -1.33
HERPUD1-206ENST00000563343 M0R1B8 84 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 RGS14O43566 566 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 KERAO60938 352 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 RAD51DO75771 328 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 UTS2O95399 124 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 PSMG1O95456 288 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 S100BP04271 92 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 IGFBP1P08833 259 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 LINGO3P0C6S8 592 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 HKR1P10072 659 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 PGCP20142 388 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 ENPP1P22413 925 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 IVDP26440 423 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 SFTPDP35247 375 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 FOXG1P55316 489 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 SLC25A3Q00325 362 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 RIN1Q13671 783 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 ERCC6LQ2NKX8 1250 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 GRAMD1BQ3KR37 738 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 ARL13AQ5H913 290 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 PDSS1Q5T2R2 415 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 COMMD6Q7Z4G1 85 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 SVOPLQ8N434 492 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 WDR31Q8NA23 367 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 RNF214Q8ND24 703 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 STAG3L4Q8TBR4 150 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 ACTRT2Q8TDY3 377 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 FBF1Q8TES7 1133 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 MRPL24Q96A35 216 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 FBXO17Q96EF6 278 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 ZNF300Q96RE9 604 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 GPR22Q99680 433 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 BAG1Q99933 345 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 MYNNQ9NPC7 610 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 TAS2R9Q9NYW1 312 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 NTMQ9P121 344 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 UTS2RQ9UKP6 389 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 WBP11Q9Y2W2 641 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 TRAF6Q9Y4K3 522 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 ATP23Q9Y6H3 246 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 ZNF780BQ9Y6R6 833 aa6.74□□□□□ -1.33
HERPUD1-206ENST00000563343 WNK2Q9Y3S1 2297 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 IGHV3-15A0A0B4J1V0 119 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 SUPT3HB4E1H0 165 aa6.73□□□□□ -1.33
HERPUD1-206ENST00000563343 ALG1L2C9J202 215 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms