RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 RNF130Q86XS8 419 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 DMRTC2Q8IXT2 367 aaPredicted RBP14.26□□□□□ -0.13
USB1-208ENST00000563207 OIT3Q8WWZ8 545 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 CDS1Q92903 461 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 CMTM5Q96DZ9 223 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 ANGPTL4Q9BY76 406 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 HOXD1Q9GZZ0 328 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 OR51I1Q9H343 314 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 SLC6A13Q9NSD5 602 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 GID8Q9NWU2 228 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 ARMCX1Q9P291 453 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 LIPT1Q9Y234 373 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 HIVEP1P15822 2718 aa14.26□□□□□ -0.13
USB1-208ENST00000563207 TRBV5-3A0A0A0MS03 114 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 C2orf72A6NCS6 295 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 EVPLLA8MZ36 301 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 TRIM3O75382 744 aaPredicted RBP14.25□□□□□ -0.13
USB1-208ENST00000563207 NGFRP08138 427 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 CD1EP15812 388 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 ATP6V1C1P21283 382 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 PRDX6P30041 224 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 CASP3P42574 277 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 CLK3P49761 638 aaKnown RBP14.25□□□□□ -0.13
USB1-208ENST00000563207 RPS26P62854 115 aaKnown RBP14.25□□□□□ -0.13
USB1-208ENST00000563207 TRMT5Q32P41 509 aaKnown RBP14.25□□□□□ -0.13
USB1-208ENST00000563207 DCST2Q5T1A1 773 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 C1orf185Q5T7R7 199 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 B3GNT6Q6ZMB0 384 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 C16orf62Q7Z3J2 963 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 DHDDSQ86SQ9 333 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 RETREG3Q86VR2 466 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 SNX32Q86XE0 403 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 CCDC197Q8NCU1 140 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 OR5D16Q8NGK9 328 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 FBXO30Q8TB52 745 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 RNF138Q8WVD3 245 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 XAGE5Q8WWM1 108 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 PMM1Q92871 262 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 EFHD2Q96C19 240 aaPredicted RBP14.25□□□□□ -0.13
USB1-208ENST00000563207 NTNG2Q96CW9 530 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 GNRHR2Q96P88 292 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 CGREF1Q99674 301 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 DOHHQ9BU89 302 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 SERHL2Q9H4I8 314 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 METTL7AQ9H8H3 244 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 POLE3Q9NRF9 147 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 SLC25A37Q9NYZ2 338 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 VAPAQ9P0L0 249 aa14.25□□□□□ -0.13
USB1-208ENST00000563207 LOC100653049A0A140TA62 436 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 TMEM247A6NEH6 219 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 FIGNL2A6NMB9 653 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 HMGN4O00479 90 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 FBP2O00757 339 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 NDUFAB1O14561 156 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 STX11O75558 287 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 KRT34O76011 436 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 OR12D1P0DN82 309 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 BMP2P12643 396 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 COX4I1P13073 169 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 CYP4B1P13584 511 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 MVDP53602 400 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 NFYCQ13952 458 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 GNA13Q14344 377 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 TESK1Q15569 626 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 RUNDC3AQ59EK9 446 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 WLSQ5T9L3 541 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 FAM91A1Q658Y4 838 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 TNFAIP8L2Q6P589 184 aaPredicted RBP14.24□□□□□ -0.13
USB1-208ENST00000563207 CDH24Q86UP0 819 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 PACS2Q86VP3 889 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 MSRB3Q8IXL7 192 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 NAXEQ8NCW5 288 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 NEIL3Q8TAT5 605 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 BCAS4Q8TDM0 211 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 DTNBP1Q96EV8 351 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 TMEM41AQ96HV5 264 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 ANKRD27Q96NW4 1050 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 TRNT1Q96Q11 434 aaKnown RBP14.24□□□□□ -0.13
USB1-208ENST00000563207 SDF2Q99470 211 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 SH3GL1Q99961 368 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 EFCAB1Q9HAE3 211 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 SDHAF3Q9NRP4 125 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 UBQLN4Q9NRR5 601 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 SLAMF8Q9P0V8 285 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 BOKQ9UMX3 212 aaPredicted RBP14.24□□□□□ -0.13
USB1-208ENST00000563207 SLC6A5Q9Y345 797 aa14.24□□□□□ -0.13
USB1-208ENST00000563207 HRNRQ86YZ3 2850 aaPredicted RBP14.24□□□□□ -0.13
USB1-208ENST00000563207 ANKRD17O75179 2603 aaKnown RBP14.23□□□□□ -0.13
USB1-208ENST00000563207 PRAMEF25A6NGN4 478 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 MRASO14807 208 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 HCN1O60741 890 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 UTS2O95399 124 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 IGKV1D-16P01601 117 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 HOXD4P09016 255 aaPredicted RBP14.23□□□□□ -0.13
USB1-208ENST00000563207 GPX2P18283 190 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 TBXA2RP21731 343 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 GDF1P27539 372 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 EVI2BP34910 448 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 CRATP43155 626 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 RFX3P48380 749 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms