RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 RPS4XP62701 263 aaKnown RBP11.6□□□□□ -0.55
SF3B3-202ENST00000562722 VEZF1Q14119 521 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 CAPRIN1Q14444 709 aaKnown RBP11.6□□□□□ -0.55
SF3B3-202ENST00000562722 PLPPR5Q32ZL2 321 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 TMEM201Q5SNT2 666 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 CLEC6AQ6EIG7 209 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 MISPQ8IVT2 679 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 LILRA2Q8N149 483 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 STEAP2Q8NFT2 490 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 OR6Y1Q8NGX8 325 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 CLHC1Q8NHS4 586 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 B4GALNT2Q8NHY0 566 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 ACTRT2Q8TDY3 377 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 ROBO4Q8WZ75 1007 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 OSTF1Q92882 214 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 GTPBP3Q969Y2 492 aaKnown RBP11.6□□□□□ -0.55
SF3B3-202ENST00000562722 S100PBPQ96BU1 408 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 ADGRG7Q96K78 797 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 KLHL15Q96M94 604 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 TSSK3Q96PN8 268 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 NPAS1Q99742 590 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 REEP4Q9H6H4 257 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 TIGARQ9NQ88 270 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 ZNF701Q9NV72 531 aaPredicted RBP11.6□□□□□ -0.55
SF3B3-202ENST00000562722 C1orf109Q9NX04 203 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 DSCAMO60469 2012 aa11.6□□□□□ -0.55
SF3B3-202ENST00000562722 A0A1W2PPM1 405 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 C7orf72A4D263 438 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 TMCC2O75069 709 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 NUDT14O95848 222 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 PAX1P15863 534 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 PSMB1P20618 241 aaKnown RBP11.59□□□□□ -0.55
SF3B3-202ENST00000562722 EFNA1P20827 205 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-202ENST00000562722 SERPINB4P48594 390 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 RNF144AP50876 292 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-202ENST00000562722 RPL38P63173 70 aaKnown RBP11.59□□□□□ -0.55
SF3B3-202ENST00000562722 TNK1Q13470 666 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 TSC22D1Q15714 1073 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 DUSP5Q16690 384 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 CCDC153Q494R4 210 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 CCNJQ5T5M9 372 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 MFSD12Q6NUT3 480 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 ZAR1Q86SH2 424 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 IFT20Q8IY31 132 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 ZNF619Q8N2I2 560 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 SLC16A11Q8NCK7 471 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 ATP6V1C2Q8NEY4 427 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 ABHD3Q8WU67 409 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 TRMT61AQ96FX7 289 aaKnown RBP11.59□□□□□ -0.55
SF3B3-202ENST00000562722 C16orf58Q96GQ5 468 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 METTL2AQ96IZ6 378 aaKnown RBP11.59□□□□□ -0.55
SF3B3-202ENST00000562722 CCT7Q99832 543 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 TMEM204Q9BSN7 226 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 REPIN1Q9BWE0 567 aaKnown RBP11.59□□□□□ -0.55
SF3B3-202ENST00000562722 TNFRSF12AQ9NP84 129 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 NGBQ9NPG2 151 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 UBQLN4Q9NRR5 601 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 RNF115Q9Y4L5 304 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 JMJD1CQ15652 2540 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 HIVEP2P31629 2446 aa11.59□□□□□ -0.55
SF3B3-202ENST00000562722 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 CHEK2O96017 543 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 PROCP04070 461 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 CD3EP07766 207 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 SDC1P18827 310 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 ATP6V1C1P21283 382 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 PSMA4P25789 261 aaKnown RBP11.58□□□□□ -0.56
SF3B3-202ENST00000562722 LCN1P31025 176 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 EIF1P41567 113 aaKnown RBP11.58□□□□□ -0.56
SF3B3-202ENST00000562722 CCT5P48643 541 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 PRIM2P49643 509 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 DNAJB13P59910 316 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 DMTNQ08495 405 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 ZNF844Q08AG5 666 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 FOXF1Q12946 379 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 RNPS1Q15287 305 aaKnown RBP11.58□□□□□ -0.56
SF3B3-202ENST00000562722 CD226Q15762 336 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 ZNF239Q16600 458 aaKnown RBP11.58□□□□□ -0.56
SF3B3-202ENST00000562722 CLEC12BQ2HXU8 276 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 GALNTL6Q49A17 601 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 ZNF385BQ569K4 471 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 TRABD2AQ86V40 505 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 CNPY4Q8N129 248 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 MAPK1IP1LQ8NDC0 245 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 RAB3IL1Q8TBN0 382 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 POC1BQ8TC44 478 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 PHOSPHO1Q8TCT1 267 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 IGFBPL1Q8WX77 278 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 HOXB13Q92826 284 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-202ENST00000562722 FBXW5Q969U6 566 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 CPNE4Q96A23 557 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-202ENST00000562722 GIMAP5Q96F15 307 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 HDHD5Q9BXW7 423 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 OR10A4Q9H209 315 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 ESRP2Q9H6T0 727 aaKnown RBP11.58□□□□□ -0.56
SF3B3-202ENST00000562722 ZCCHC3Q9NUD5 404 aaKnown RBP11.58□□□□□ -0.56
SF3B3-202ENST00000562722 FBXO34Q9NWN3 711 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 GIN1Q9NXP7 522 aa11.58□□□□□ -0.56
SF3B3-202ENST00000562722 BAIAP2L1Q9UHR4 511 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms