RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MACC1Q6ZN28 852 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 SFTPA1Q8IWL2 248 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 ARMC5Q96C12 935 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 CHFRQ96EP1 664 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 LYSMD1Q96S90 227 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 ARHGAP9Q9BRR9 750 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 PDCD10Q9BUL8 212 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 ACTR6Q9GZN1 396 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 POLR2J3Q9H1A7 115 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 PRDM9Q9NQV7 894 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 ZDHHC3Q9NYG2 299 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 TAS2R3Q9NYW6 316 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 CLEC4AQ9UMR7 237 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 OARD1Q9Y530 152 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 C1orf226A1L170 272 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 TMEM202A6NGA9 273 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 AGAP14A8MT82 685 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 GPR31O00270 319 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 TO15178 435 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 FZD7O75084 574 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 SMIM6P0DI80 62 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 DGCR2P98153 550 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 SNTB2Q13425 540 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 SEC23BQ15437 767 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 SF1Q15637 639 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 ZNF77Q15935 545 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 PYHIN1Q6K0P9 492 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 MTFR2Q6P444 385 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 RBMS3Q6XE24 437 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 NAXDQ8IW45 347 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 CAMKVQ8NCB2 501 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 ZNF707Q96C28 371 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 DUSP26Q9BV47 211 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 TEX10Q9NXF1 929 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 CA5BQ9Y2D0 317 aa13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 MRPS23Q9Y3D9 190 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-203ENST00000562609 PLXNB3Q9ULL4 1909 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 HELZP42694 1942 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 TRBC2A0A5B9 178 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 PMS2P1A4D2B8 440 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 ARRDC5A6NEK1 342 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 SRPRAP08240 638 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 PPP3CBP16298 524 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 GSG1LQ6UXU4 331 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 DBX2Q6ZNG2 339 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 CBARPQ8N350 705 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 FAM26EQ8N5C1 309 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 LILRA3Q8N6C8 439 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 PXT1Q8NFP0 134 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 OR8J2Q8NGG1 315 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 GLYATL2Q8WU03 294 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 RSPRY1Q96DX4 576 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 RNFT2Q96EX2 444 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 ATG10Q9H0Y0 220 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 ISYNA1Q9NPH2 558 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 EXOSC3Q9NQT5 275 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 MYEF2Q9P2K5 600 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 ACSL6Q9UKU0 697 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 CORO2BQ9UQ03 480 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 TRIOO75962 3097 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 OTOL1A6NHN0 477 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 FFAR1O14842 300 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 STK16O75716 305 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 SPDEFO95238 335 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 RECKO95980 971 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 WNT1P04628 370 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 LIMS3P0CW19 117 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 LIMS4P0CW20 117 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 PTAFRP25105 342 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 RORAP35398 523 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 VEGFCP49767 419 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 LBX1P52954 281 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 GAS1P54826 345 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 SEC61A1P61619 476 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 UAP1L1Q3KQV9 507 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 GCNT6Q5T4J0 391 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 HACD4Q5VWC8 232 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 SFRP4Q6FHJ7 346 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 ZNF852Q6ZMS4 543 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 SLITRK4Q8IW52 837 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 C7orf61Q8IZ16 206 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 CSGALNACT1Q8TDX6 532 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 ELP4Q96EB1 424 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 ZNF285Q96NJ3 590 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 WRAP53Q9BUR4 548 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 CPEB1Q9BZB8 566 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 NFKBIL1Q9UBC1 381 aaPredicted RBP13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 MIOXQ9UGB7 285 aa13.11□□□□□ -0.31
GTF3C1-203ENST00000562609 DISC1C4P0D8 188 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 GALR3O60755 368 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 HTR3BO95264 441 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 IFNW1P05000 195 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 CBSLP0DN79 551 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 NPR2P20594 1047 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 PPIBP23284 216 aaKnown RBP13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 CBSP35520 551 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 HSD17B2P37059 387 aa13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 ZNF660Q6AZW8 331 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-203ENST00000562609 ELP2Q6IA86 826 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms