RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.15□□□□□ -0.3
COMMD4-205ENST00000562310 SLC30A4O14863 429 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 FRS3O43559 492 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 SEMA7AO75326 666 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 PPM1BO75688 479 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 ITGAMP11215 1152 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 CYP4B1P13584 511 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 RBMS1P29558 406 aaKnown RBP13.15□□□□□ -0.3
COMMD4-205ENST00000562310 GABREP78334 506 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 PIN1Q13526 163 aaPredicted RBP13.15□□□□□ -0.3
COMMD4-205ENST00000562310 SSPNQ14714 243 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 BTBD16Q32M84 506 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 KLHL26Q53HC5 615 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 ENTPD8Q5MY95 495 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 TTC23Q5W5X9 447 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 IGF2-ASQ6U949 168 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 NDUFAF7Q7L592 441 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 CHERPQ8IWX8 916 aaKnown RBP13.15□□□□□ -0.3
COMMD4-205ENST00000562310 SLC15A4Q8N697 577 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 ZNF555Q8NEP9 628 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 OR52J3Q8NH60 311 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 SLC22A8Q8TCC7 542 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 ELP5Q8TE02 316 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 CYGBQ8WWM9 190 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 ADAMTS14Q8WXS8 1223 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 SLC38A4Q969I6 547 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 IMMP1LQ96LU5 166 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 LMF1Q96S06 567 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 BARD1Q99728 777 aaKnown RBP13.15□□□□□ -0.3
COMMD4-205ENST00000562310 WFDC6Q9BQY6 131 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 FUZQ9BT04 418 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 DEFB126Q9BYW3 111 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 TRIM2Q9C040 744 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 NRSN2Q9GZP1 204 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 MMP25Q9NPA2 562 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 EXOSC3Q9NQT5 275 aaKnown RBP13.15□□□□□ -0.3
COMMD4-205ENST00000562310 KRT84Q9NSB2 600 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 DNAJB12Q9NXW2 375 aaKnown RBP13.15□□□□□ -0.3
COMMD4-205ENST00000562310 RHCGQ9UBD6 479 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 TMEFF2Q9UIK5 374 aaPredicted RBP13.15□□□□□ -0.3
COMMD4-205ENST00000562310 POFUT2Q9Y2G5 429 aa13.15□□□□□ -0.3
COMMD4-205ENST00000562310 NSG1A0A0A6YYJ2 146 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 TRBV4-1A0A0J9YWV2 114 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 SH3PXD2BA1X283 911 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 TRAPPC13A5PLN9 417 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 CPSF4LA6NMK7 179 aaKnown RBP13.14□□□□□ -0.31
COMMD4-205ENST00000562310 SOCS6O14544 535 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 SNAP29O95721 258 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 ADAP00813 363 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 CSTAP01040 98 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 UBL4AP11441 157 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 ICAM2P13598 275 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 PRKACGP22612 351 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 IFNGR2P38484 337 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 DAPP51397 102 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 RPS6KA3P51812 740 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 LAPTM4AQ15012 233 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 SLC36A3Q495N2 470 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 ZNF613Q6PF04 617 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 KIRREL2Q6UWL6 708 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 PPP1R32Q7Z5V6 425 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 RAB43Q86YS6 212 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 PRR22Q8IZ63 422 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 SLC5A8Q8N695 610 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 FAM71CQ8NEG0 241 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 OR11G2Q8NGC1 345 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 OR4C3Q8NH37 302 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 ADAMTS16Q8TE57 1224 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 CNOT9Q92600 299 aaKnown RBP13.14□□□□□ -0.31
COMMD4-205ENST00000562310 SLC41A3Q96GZ6 507 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 ADOQ96SZ5 270 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 MESP1Q9BRJ9 268 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 TOR3AQ9H497 397 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 TMEM27Q9HBJ8 222 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 HHATLQ9HCP6 504 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 PAPOLBQ9NRJ5 636 aaKnown RBP13.14□□□□□ -0.31
COMMD4-205ENST00000562310 MAN2C1Q9NTJ4 1040 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 MGAT4BQ9UQ53 548 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 NPFFR2Q9Y5X5 522 aa13.14□□□□□ -0.31
COMMD4-205ENST00000562310 CDC14CA4D256 554 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 TERTO14746 1132 aaKnown RBP13.13□□□□□ -0.31
COMMD4-205ENST00000562310 PRKNO60260 465 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-205ENST00000562310 TPST2O60704 377 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 ICOSLGO75144 302 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 CYP7B1O75881 506 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 HPP00738 406 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 CBLP22681 906 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 MYF6P23409 242 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 DLSTP36957 453 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 CLK3P49761 638 aaKnown RBP13.13□□□□□ -0.31
COMMD4-205ENST00000562310 UGT2B15P54855 530 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 ADARB1P78563 741 aaKnown RBP13.13□□□□□ -0.31
COMMD4-205ENST00000562310 IL18R1Q13478 541 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 PDK3Q15120 406 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 FNDC7Q5VTL7 733 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 ZNF770Q6IQ21 691 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-205ENST00000562310 PARP8Q8N3A8 854 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 SLC7A13Q8TCU3 470 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 IP6K3Q96PC2 410 aa13.13□□□□□ -0.31
COMMD4-205ENST00000562310 MBOAT4Q96T53 435 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms