RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 FNDC3BQ53EP0 1204 aaKnown RBP13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 NIPAL3Q6P499 406 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 SIAH3Q8IW03 269 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 RAB42Q8N4Z0 105 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 ACOT4Q8N9L9 421 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 OR52L1Q8NGH7 329 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 ADAMTS15Q8TE58 950 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 NDC1Q9BTX1 674 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 JAM3Q9BX67 310 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 DPH1Q9BZG8 443 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 OR51V1Q9H2C8 321 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 OR52D1Q9H346 318 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 BEX1Q9HBH7 125 aa13.02□□□□□ -0.32
VPS9D1-202ENST00000561976 TEX51A0A1B0GUA7 166 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 SYNDIG1LA6NDD5 238 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 J3QLW9 94 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 J3QRE1 110 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 MT-ND5P03915 603 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 PCCBP05166 539 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 ZNF19P17023 458 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 HIST1H1TP22492 207 aaPredicted RBP13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 E2F1Q01094 437 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 SNTA1Q13424 505 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 SLC36A2Q495M3 483 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 LILRA6Q6PI73 481 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 ABHD4Q8TB40 342 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 CXorf40AQ8TE69 158 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 C12orf66Q96MD2 445 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 POLMQ9NP87 494 aaPredicted RBP13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 COQ3Q9NZJ6 369 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 TMEM5Q9Y2B1 443 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 LRRK1Q38SD2 2015 aa13.02□□□□□ -0.33
VPS9D1-202ENST00000561976 LAMA2P24043 3122 aaKnown RBP13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 HEATR5BQ9P2D3 2071 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 CIB4A0PJX0 185 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 C4orf51C9J302 202 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 SLC9A3R1O14745 358 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 KLF4O43474 513 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 ADH1AP07327 375 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 BMP7P18075 431 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 CERS1P27544 350 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 PRKAR1BP31321 381 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 GALEQ14376 348 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 LTB4RQ15722 352 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 ZNF77Q15935 545 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 ZSWIM7Q19AV6 140 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 TMEM35AQ53FP2 167 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 TPRA1Q86W33 373 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 PIAS4Q8N2W9 510 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 FANK1Q8TC84 345 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 GANCQ8TET4 914 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 OR8D1Q8WZ84 308 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 MENTQ9BUN1 341 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 HCAR1Q9BXC0 346 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 SPRTNQ9H040 489 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 ZBP1Q9H171 429 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 NUP50Q9UKX7 468 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 PRELID1Q9Y255 219 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 IGKV1-8A0A0C4DH67 115 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 UNC119BA6NIH7 251 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 FGF18O76093 207 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 OR7A10O76100 309 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 OR5F1O95221 314 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 IFNA7P01567 189 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 H2AFB2P0C5Z0 115 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 HOXB3P14651 431 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 ENPP1P22413 925 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 DNASE1P24855 282 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 BCL6P41182 706 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 CLDN2P57739 230 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 SHC2P98077 582 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 DGCR2P98153 550 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 HSF2Q03933 536 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 PRDX1Q06830 199 aaKnown RBP13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 PRPF38BQ5VTL8 546 aaKnown RBP13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 HACD4Q5VWC8 232 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 METRNLQ641Q3 311 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 COMMD7Q86VX2 200 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 MARVELD3Q96A59 401 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 ELP4Q96EB1 424 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 MSANTD3Q96H12 275 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 ZSWIM3Q96MP5 696 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 C1QTNF2Q9BXJ5 285 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 PTTG3PQ9NZH4 202 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.01□□□□□ -0.33
VPS9D1-202ENST00000561976 A0A1W2PPK0 400 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 ZGLP1P0C6A0 271 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 PEPDP12955 493 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 ZNF250P15622 560 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 AGERQ15109 404 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 FAAH2Q6GMR7 532 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 MTFR2Q6P444 385 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 CNKSR3Q6P9H4 555 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 RPTNQ6XPR3 784 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 TTLQ8NG68 377 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 GIMAP1Q8WWP7 306 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 ADAMTS14Q8WXS8 1223 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 COL26A1Q96A83 441 aa13□□□□□ -0.33
VPS9D1-202ENST00000561976 MS4A6EQ96DS6 147 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms