RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CD226Q15762 336 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 CHI3L2Q15782 390 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 PLPPR5Q32ZL2 321 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 LSM12Q3MHD2 195 aaKnown RBP9.25□□□□□ -0.93
CLK3-205ENST00000561673 KRT71Q3SY84 523 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 FBXW10Q5XX13 1052 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 CDC73Q6P1J9 531 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 ZNF474Q6S9Z5 364 aaPredicted RBP9.25□□□□□ -0.93
CLK3-205ENST00000561673 GTPBP8Q8N3Z3 284 aaPredicted RBP9.25□□□□□ -0.93
CLK3-205ENST00000561673 NATD1Q8N6N6 113 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 ZNF781Q8N8C0 355 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 PPP1R14CQ8TAE6 165 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 ACTRT2Q8TDY3 377 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 ZBTB9Q96C00 473 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 CHMP6Q96FZ7 201 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 PGM2Q96G03 612 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 SH3YL1Q96HL8 342 aaPredicted RBP9.25□□□□□ -0.93
CLK3-205ENST00000561673 PPP1R36Q96LQ0 422 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 FOXC2Q99958 501 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 ACTRT3Q9BYD9 372 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 BHLHE41Q9C0J9 482 aaPredicted RBP9.25□□□□□ -0.93
CLK3-205ENST00000561673 OPN3Q9H1Y3 402 aaPredicted RBP9.25□□□□□ -0.93
CLK3-205ENST00000561673 CXXC4Q9H2H0 198 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 PIGUQ9H490 435 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 PLEKHF2Q9H8W4 249 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 HHATLQ9HCP6 504 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 MED17Q9NVC6 651 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 STOML1Q9UBI4 398 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 NDRG3Q9UGV2 375 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 EIF3LQ9Y262 564 aaKnown RBP9.25□□□□□ -0.93
CLK3-205ENST00000561673 ZNF175Q9Y473 711 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 KCNE3Q9Y6H6 103 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 A0A1W2PQD3 144 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 C7orf72A4D263 438 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 EIF1AYO14602 144 aaKnown RBP9.24□□□□□ -0.93
CLK3-205ENST00000561673 BIRC5O15392 142 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 CFLARO15519 480 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 ZNF500O60304 480 aaPredicted RBP9.24□□□□□ -0.93
CLK3-205ENST00000561673 HRGP04196 525 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 SERPINE1P05121 402 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 ZNF17P17021 662 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 DNASE1P24855 282 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 PSMA4P25789 261 aaKnown RBP9.24□□□□□ -0.93
CLK3-205ENST00000561673 EIF1AXP47813 144 aaKnown RBP9.24□□□□□ -0.93
CLK3-205ENST00000561673 SLC6A8P48029 635 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 CLDN8P56748 225 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 C21orf58P58505 322 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 ABCE1P61221 599 aaKnown RBP9.24□□□□□ -0.93
CLK3-205ENST00000561673 RPS3AP61247 264 aaKnown RBP9.24□□□□□ -0.93
CLK3-205ENST00000561673 HBA1P69905 142 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 SIRPAP78324 504 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 MAD2L1Q13257 205 aaPredicted RBP9.24□□□□□ -0.93
CLK3-205ENST00000561673 TP53BP2Q13625 1128 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 MPP2Q14168 576 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 GUSBP1Q15486 140 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 PDCD2Q16342 344 aaPredicted RBP9.24□□□□□ -0.93
CLK3-205ENST00000561673 SGCBQ16585 318 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 PGS1Q32NB8 556 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 SPDYE7PQ495Y7 208 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 KLHL26Q53HC5 615 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 MISPQ8IVT2 679 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 WDR75Q8IWA0 830 aaKnown RBP9.24□□□□□ -0.93
CLK3-205ENST00000561673 OR56A1Q8NGH5 318 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 OR5AK3PQ8NH89 298 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 B4GALNT2Q8NHY0 566 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 POC1BQ8TC44 478 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 ADAMTS15Q8TE58 950 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 ZBTB8AQ96BR9 441 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 ADGRG7Q96K78 797 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 RNF145Q96MT1 663 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 WFIKKN1Q96NZ8 548 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 DUSP26Q9BV47 211 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 AKTIPQ9H8T0 292 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 SSU72Q9NP77 194 aaKnown RBP9.24□□□□□ -0.93
CLK3-205ENST00000561673 ASIC5Q9NY37 505 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 NOP53Q9NZM5 478 aaKnown RBP9.24□□□□□ -0.93
CLK3-205ENST00000561673 RAB21Q9UL25 225 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 EDARQ9UNE0 448 aa9.24□□□□□ -0.93
CLK3-205ENST00000561673 FAF1Q9UNN5 650 aaPredicted RBP9.24□□□□□ -0.93
CLK3-205ENST00000561673 PCNX3Q9H6A9 2034 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 NPIPA5A0A0B4J1W7 369 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 A0A1W2PPR1 153 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 NPIPA7E9PJI5 369 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 TNFSF11O14788 317 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 CASKO14936 926 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 ADAMDEC1O15204 470 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 TM9SF1O15321 606 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 SOX30O94993 753 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 GOSR1O95249 250 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 ATE1O95260 518 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 LINGO3P0C6S8 592 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 DHRS4L1P0CG22 281 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 NPIPA8P0DM63 369 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 IL11P20809 199 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 ATP6V1C1P21283 382 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 UGT2B10P36537 528 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 CD79BP40259 229 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 SLC1A6P48664 564 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 PCYT1AP49585 367 aa9.23□□□□□ -0.93
CLK3-205ENST00000561673 RNF144AP50876 292 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms