RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 ZG16BQ96DA0 208 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 CLIP3Q96DZ5 547 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 RNF31Q96EP0 1072 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 RMND5BQ96G75 393 aaPredicted RBP6.95□□□□□ -1.3
TPM1-231ENST00000561395 SENP5Q96HI0 755 aaPredicted RBP6.95□□□□□ -1.3
TPM1-231ENST00000561395 SPSB2Q99619 263 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 CMKLR1Q99788 373 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 ARHGDIGQ99819 225 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 USB1Q9BQ65 265 aaKnown RBP6.95□□□□□ -1.3
TPM1-231ENST00000561395 PSD2Q9BQI7 771 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 WFDC6Q9BQY6 131 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 ITPAQ9BY32 194 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 TOR3AQ9H497 397 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 CACYBPQ9HB71 228 aaKnown RBP6.95□□□□□ -1.3
TPM1-231ENST00000561395 PNO1Q9NRX1 252 aaKnown RBP6.95□□□□□ -1.3
TPM1-231ENST00000561395 ACER3Q9NUN7 267 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 KIF17Q9P2E2 1029 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 PRODH2Q9UF12 536 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 MKLN1Q9UL63 735 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 MKL2Q9ULH7 1088 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 DTX4Q9Y2E6 619 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 CHST2Q9Y4C5 530 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 ORC6Q9Y5N6 252 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 SEC16AO15027 2179 aa6.95□□□□□ -1.3
TPM1-231ENST00000561395 CSMD1Q96PZ7 3565 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 CENPVL1A0A0U1RR11 272 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 MAGEA13PA6NCF6 341 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 ARRDC5A6NEK1 342 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 A8MUA0 341 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 B4E171 279 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 POLR1CO15160 346 aaPredicted RBP6.94□□□□□ -1.3
TPM1-231ENST00000561395 UGT2B17O75795 530 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 AGFG2O95081 481 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 GADD45GO95257 159 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 IGKV1D-16P01601 117 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 DBIP07108 87 aaKnown RBP6.94□□□□□ -1.3
TPM1-231ENST00000561395 H1F0P07305 194 aaKnown RBP6.94□□□□□ -1.3
TPM1-231ENST00000561395 LYNP07948 512 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 GNAO1P09471 354 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 ZGLP1P0C6A0 271 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 CT45A8P0DMV1 189 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 CT45A9P0DMV2 189 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 ITGAMP11215 1152 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 NID1P14543 1247 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 ELAVL4P26378 380 aaKnown RBP6.94□□□□□ -1.3
TPM1-231ENST00000561395 PIGAP37287 484 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 TSPAN7P41732 249 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 HMGA2P52926 109 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 RAD23AP54725 363 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 SMIM11AP58511 58 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 OCA2Q04671 838 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 GANABQ14697 944 aaKnown RBP6.94□□□□□ -1.3
TPM1-231ENST00000561395 LARS2Q15031 903 aaKnown RBP6.94□□□□□ -1.3
TPM1-231ENST00000561395 NSDHLQ15738 373 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 GPR68Q15743 365 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 MAPK14Q16539 360 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 MICAQ29983 383 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 ZIK1Q3SY52 487 aaPredicted RBP6.94□□□□□ -1.3
TPM1-231ENST00000561395 FLYWCH1Q4VC44 716 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 CT45A2Q5DJT8 189 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 ZNF787Q6DD87 383 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 BORAQ6PGQ7 559 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 FIGNL1Q6PIW4 674 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 DEF8Q6ZN54 512 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 ZNF836Q6ZNA1 936 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 LANCL3Q6ZV70 420 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 USP51Q70EK9 711 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 RAB11FIP2Q7L804 512 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 OVCH1Q7RTY7 1134 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 ZAR1Q86SH2 424 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 PRSS58Q8IYP2 241 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 TAGAPQ8N103 731 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 ZNF321PQ8N8H1 164 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 ATG16L2Q8NAA4 619 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 PIK3C3Q8NEB9 887 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 OR10G2Q8NGC3 310 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 OR6T1Q8NGN1 323 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 OR52J3Q8NH60 311 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 STT3BQ8TCJ2 826 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 SLC2A12Q8TD20 617 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 ZNF721Q8TF20 911 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 GIPC3Q8TF64 312 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 PHF10Q8WUB8 498 aaKnown RBP6.94□□□□□ -1.3
TPM1-231ENST00000561395 NR4A3Q92570 626 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 DAZLQ92904 295 aaKnown RBP6.94□□□□□ -1.3
TPM1-231ENST00000561395 MIB2Q96AX9 1013 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 ART5Q96L15 291 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 PRRC1Q96M27 445 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 CTRCQ99895 268 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 FUZQ9BT04 418 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 SLC26A1Q9H2B4 701 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 SOX17Q9H6I2 414 aaPredicted RBP6.94□□□□□ -1.3
TPM1-231ENST00000561395 NMNAT1Q9HAN9 279 aaPredicted RBP6.94□□□□□ -1.3
TPM1-231ENST00000561395 Q9N2J8 555 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 FBXO8Q9NRD0 319 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 KRT84Q9NSB2 600 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 FBXO34Q9NWN3 711 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 KLHL28Q9NXS3 571 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 TUBD1Q9UJT1 453 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 C3orf18Q9UK00 162 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms