RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 IKBIPQ70UQ0 350 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 GTF2IRD2Q86UP8 949 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 ACTRT2Q8TDY3 377 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 AKAP1Q92667 903 aaKnown RBP eCLIP10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 ZBTB8AQ96BR9 441 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 KCNA7Q96RP8 456 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 HDHD5Q9BXW7 423 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 LGALS13Q9UHV8 139 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 LAMP3Q9UQV4 416 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 ACTL7BQ9Y614 415 aa10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 CHD3Q12873 2000 aaKnown RBP10.57□□□□□ -0.72
CARMIL3-204ENST00000561354 GXYLT2A0PJZ3 443 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 NDUFB5O43674 189 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 CXCL13O43927 109 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 GMFGO60234 142 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 NKX2-2O95096 273 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 IGKV1D-16P01601 117 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 SHBGP04278 402 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 PRPS2P11908 318 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 AGTR1P30556 359 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 MDH1P40925 334 aaKnown RBP10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 MAGOHP61326 146 aaKnown RBP10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 CLEC12BQ2HXU8 276 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 VPS26BQ4G0F5 336 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 TNFAIP8L3Q5GJ75 292 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 PDSS1Q5T2R2 415 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 CPTPQ5TA50 214 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 TRIM46Q7Z4K8 759 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 GALNT10Q86SR1 603 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 TDRPQ86YL5 185 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 STEAP2Q8NFT2 490 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 OR4C3Q8NH37 302 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 OR2V1Q8NHB1 315 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 LILRB1Q8NHL6 650 aaPredicted RBP10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 CDC26Q8NHZ8 85 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 GPR151Q8TDV0 419 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 PIK3R3Q92569 461 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 TRMT61AQ96FX7 289 aaKnown RBP10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 METTL2AQ96IZ6 378 aaKnown RBP10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 GSTO2Q9H4Y5 243 aa10.56□□□□□ -0.72
CARMIL3-204ENST00000561354 A0A0J9YW62 118 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 EXOC1LA0A1B0GW35 172 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 A0A1W2PRB8 838 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 RNF223E7ERA6 249 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 UBFD1O14562 309 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 TNFSF11O14788 317 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 TLX2O43763 284 aaPredicted RBP10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 RSL1D1O76021 490 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 OXSR1O95747 527 aaPredicted RBP10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 DANCRP0C864 163 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 PABPC4LP0CB38 370 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 NID1P14543 1247 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 LCN1P31025 176 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 IDUAP35475 653 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 FOXA1P55317 472 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 GNGT1P63211 74 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 SLC18A2Q05940 514 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 VEZF1Q14119 521 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 IMPG1Q17R60 797 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 PLPPR5Q32ZL2 321 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 NCMAPQ5T1S8 102 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 HBMQ6B0K9 141 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 MFSD12Q6NUT3 480 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 DNAJC14Q6Y2X3 702 aaPredicted RBP10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 TRABD2AQ86V40 505 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 GABRG1Q8N1C3 465 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 CDRT4Q8N9R6 151 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 CEP70Q8NHQ1 597 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 RAB3IL1Q8TBN0 382 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 FAM110BQ8TC76 370 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 SLC9A6Q92581 669 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 S100PBPQ96BU1 408 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 ZNF764Q96H86 408 aaPredicted RBP10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 RNF145Q96MT1 663 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 NPAS1Q99742 590 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 USB1Q9BQ65 265 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 TACO1Q9BSH4 297 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 REG4Q9BYZ8 158 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 IQCGQ9H095 443 aaKnown RBP10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 MID1IP1Q9NPA3 183 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 NGBQ9NPG2 151 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 MED17Q9NVC6 651 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 NTMQ9P121 344 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 RNF115Q9Y4L5 304 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 POLR3HQ9Y535 204 aaPredicted RBP10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 SNX8Q9Y5X2 465 aa10.55□□□□□ -0.72
CARMIL3-204ENST00000561354 GCM2O75603 506 aaPredicted RBP10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 OPN1LWP04000 364 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 THBS1P07996 1170 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 SOD3P08294 240 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 ME2P23368 584 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 GCAP28676 217 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 ZNF41P51814 821 aaPredicted RBP10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 CARD18P57730 90 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 NAA20P61599 178 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 KIAA0040Q15053 153 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 TMEM201Q5SNT2 666 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 PRR14LQ5THK1 2151 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 NOXRED1Q6NXP6 359 aa10.54□□□□□ -0.72
CARMIL3-204ENST00000561354 DNM1P46Q6ZS02 220 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms