RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CDK16Q00536 496 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 CDR2Q01850 454 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 NAAAQ02083 359 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 CHRNB3Q05901 458 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 ZNF33AQ06730 810 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 ARL16Q0P5N6 197 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 DMC1Q14565 340 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 FASTKD3Q14CZ7 662 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 ETFDHQ16134 617 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 DUSP5Q16690 384 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PRTGQ2VWP7 1150 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 TRIM16LQ309B1 348 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 SLC22A6Q4U2R8 563 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 CYBRD1Q53TN4 286 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PAGE2BQ5JRK9 111 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 DCAF10Q5QP82 559 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PAPD7Q5XG87 772 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 SLC22A10Q63ZE4 541 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 C22orf42Q6IC83 251 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 OR4C11Q6IEV9 310 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 H3F3CQ6NXT2 135 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 TUBA3EQ6PEY2 450 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 UQCC3Q6UW78 93 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 ENPP6Q6UWR7 440 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 BTNL3Q6UXE8 466 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 DLK2Q6UY11 383 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 TMEM184AQ6ZMB5 413 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PLEKHG7Q6ZR37 379 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 COLCA1Q6ZS62 124 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 Q6ZSV7 163 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 GPRIN3Q6ZVF9 776 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 TUBA1AQ71U36 451 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 SLC26A9Q7LBE3 791 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PIWIL4Q7Z3Z4 852 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 DHDDSQ86SQ9 333 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 TRIM69Q86WT6 500 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 LRRC6Q86X45 466 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 ERICH1Q86X53 443 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 CACUL1Q86Y37 369 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 STX12Q86Y82 276 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 LRRC8AQ8IWT6 810 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 ZC3H3Q8IXZ2 948 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 CMTM8Q8IZV2 173 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 FBXL16Q8N461 479 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 C17orf78Q8N4C9 275 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 GVQW1Q8N7I0 195 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 GATSQ8NAP1 163 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 ADAD2Q8NCV1 583 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 NFAM1Q8NET5 270 aaPredicted RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 SDR9C7Q8NEX9 313 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 ATP6V1C2Q8NEY4 427 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 B3GNT7Q8NFL0 401 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 KBTBD8Q8NFY9 601 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 OR5T1Q8NG75 326 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 OR2T12Q8NG77 320 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 OR10H4Q8NGA5 316 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 OR5M9Q8NGP3 310 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 OR6S1Q8NH40 331 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 RPLP0P6Q8NHW5 317 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 HCAR2Q8TDS4 363 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 SAP25Q8TEE9 199 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 HPSE2Q8WWQ2 592 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 ARNTL2Q8WYA1 636 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 FAM3CQ92520 227 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 P3H4Q92791 437 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 KIFAP3Q92845 792 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 TNFRSF14Q92956 283 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 ABTB1Q969K4 478 aaPredicted RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.82□□□□□ -2.12
RTF1-207ENST00000561076 C18orf25Q96B23 403 aaPredicted RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 C8orf44Q96CB5 159 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 RTP4Q96DX8 246 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 OMA1Q96E52 524 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PLEKHA8Q96JA3 519 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PDLIM2Q96JY6 352 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 B3GALT6Q96L58 329 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 C9orf72Q96LT7 481 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 CSPG4P5Q96PW8 444 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 OR5B2Q96R09 309 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 TESK2Q96S53 571 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 LPAR4Q99677 370 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 TIMP4Q99727 224 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 SLC6A7Q99884 636 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 C7orf50Q9BRJ6 194 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 RHNO1Q9BSD3 238 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 SLC25A33Q9BSK2 321 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 SYT11Q9BT88 431 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 DCUN1D5Q9BTE7 237 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PITPNM3Q9BZ71 974 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 UPF3BQ9BZI7 483 aaKnown RBP1.82□□□□□ -2.12
RTF1-207ENST00000561076 OR2B2Q9GZK3 357 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 RAB1BQ9H0U4 201 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 SLC25A51Q9H1U9 297 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 ADNPQ9H2P0 1102 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 PPA2Q9H2U2 334 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 RHBGQ9H310 441 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 CPVLQ9H3G5 476 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 LRRC19Q9H756 370 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 NMUR1Q9HB89 426 aa1.82□□□□□ -2.12
RTF1-207ENST00000561076 POPDC2Q9HBU9 364 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms